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Tag Content
iUUCD ID IUUC-Pop-099604
Ensembl Protein ID POPTR_0002s11160.1
UniProt Accession B9GN87; B9GN87_POPTR
Genbank Protein ID EEE81638.2
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000338
Gene Name POPTRDRAFT_551710; POPTR_0002s11160g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0002s11160 POPTR_0002s11160.2 POPTR_0002s11160.2
POPTR_0002s11160 POPTR_0002s11160.1 POPTR_0002s11160.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.70e-09 37.3 2927 2958
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           +H+d v+c+a  +d ++l++Gs+D t++vW++
   Q: 2927 QHKDVVSCVAVtDDgCFLATGSYDTTVMVWEV 2958
           5**********9888***************98 PP
   
Organism Populus trichocarpa
Protein Sequence
(Fasta)
MVFEKWEPAN ASQLPEAALT TVPPVEYPLR VDDIIVGCSA GHPAEIILAL TEEITQLTSL 60
VSELNTSVVC TRVDSPGNST SLSITSEGLP LLNALTIIVR SMHNCRVFGY YSGIQKLTAL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Pop-099604|E3,WD_repeat|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCTGAAAAGA AGAAGCTATT TCATGTCTTC CTCAAGCAAT TTTTAATGGT ATTTGAGAAA 60
TGGGAACCCG CTAATGCCAG CCAGTTGCCA GAGGCTGCAT TGACAACTGT GCCTCCCGTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Pop-099604|E3,WD_repeat|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF02138--Beach
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40
SMART

SM01026--Beach
SM00320--WD40
KEGG pop:POPTR_0002s11160g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000860 Aegilops tauschii 59.02 0.00e+00 2042.00
IUUC-Atr-002998 Amborella trichopoda 60.59 0.00e+00 3814.00
IUUC-Apl-004183 Anas platyrhynchos 31.86 1.00e-124 442.00
IUUC-Aca-005124 Anolis carolinensis 32.53 8.00e-149 522.00
IUUC-Aly-005407 Arabidopsis lyrata 72.55 0.00e+00 1934.00
IUUC-Ath-007674 Arabidopsis thaliana 68.73 0.00e+00 3596.00
IUUC-Ame-011863 Astyanax mexicanus 33.70 6.00e-142 499.00
IUUC-Bta-012509 Bos taurus 38.44 4.00e-145 509.00
IUUC-Bdi-014244 Brachypodium distachyon 57.60 0.00e+00 2208.00
IUUC-Bol-015261 Brassica oleracea 67.35 0.00e+00 3502.00
IUUC-Bra-016877 Brassica rapa 68.21 0.00e+00 3515.00
IUUC-Cja-018744 Callithrix jacchus 38.77 8.00e-146 510.00
IUUC-Cfa-020786 Canis familiaris 38.44 7.00e-148 519.00
IUUC-Cpo-021636 Cavia porcellus 37.99 3.00e-141 497.00
IUUC-Csa-023251 Chlorocebus sabaeus 37.90 2.00e-141 497.00
IUUC-Csv-026337 Ciona savignyi 34.63 3.00e-118 419.00
IUUC-Dre-028627 Danio rerio 38.04 8.00e-139 489.00
IUUC-Dme-031593 Drosophila melanogaster 38.52 1.00e-138 488.00
IUUC-Ete-032532 Echinops telfairi 37.18 2.00e-115 411.00
IUUC-Eca-033893 Equus caballus 38.04 4.00e-146 513.00
IUUC-Eeu-034829 Erinaceus europaeus 28.75 1.00e-74 274.00
IUUC-Fca-035638 Felis catus 37.04 6.00e-134 473.00
IUUC-Fal-036871 Ficedula albicollis 38.32 2.00e-147 517.00
IUUC-Gga-041206 Gallus gallus 38.59 2.00e-147 518.00
IUUC-Gac-042518 Gasterosteus aculeatus 39.16 3.00e-144 507.00
IUUC-Gma-042772 Glycine max 67.94 0.00e+00 4322.00
IUUC-Ggo-045255 Gorilla gorilla 37.37 1.00e-130 460.00
IUUC-Hsa-046316 Homo sapiens 37.95 3.00e-140 493.00
IUUC-Hvu-047772 Hordeum vulgare 59.51 0.00e+00 1847.00
IUUC-Itr-048852 Ictidomys tridecemlineatus 38.04 4.00e-145 510.00
IUUC-Lch-049963 Latimeria chalumnae 33.62 1.00e-146 514.00
IUUC-Lpe-050958 Leersia perrieri 56.27 0.00e+00 2203.00
IUUC-Loc-052771 Lepisosteus oculatus 39.73 4.00e-149 523.00
IUUC-Laf-053724 Loxodonta africana 38.42 2.00e-146 514.00
IUUC-Mcc-055200 Macaca mulatta 38.85 2.00e-146 512.00
IUUC-Meu-056286 Macropus eugenii 37.48 7.00e-130 458.00
IUUC-Mtr-058372 Medicago truncatula 67.80 0.00e+00 4181.00
IUUC-Mga-059851 Meleagris gallopavo 38.93 7.00e-148 517.00
IUUC-Mmr-061112 Microcebus murinus 38.79 1.00e-146 515.00
IUUC-Mdo-062727 Monodelphis domestica 39.06 4.00e-148 519.00
IUUC-Mmu-064194 Mus musculus 38.44 4.00e-146 511.00
IUUC-Mac-064991 Musa acuminata 60.04 0.00e+00 3666.00
IUUC-Mpu-066074 Mustela putorius furo 38.44 3.00e-147 517.00
IUUC-Mlu-067308 Myotis lucifugus 35.64 8.00e-145 509.00
IUUC-Nle-069582 Nomascus leucogenys 37.95 4.00e-141 496.00
IUUC-Ont-071396 Oreochromis niloticus 38.53 7.00e-145 509.00
IUUC-Oan-073413 Ornithorhynchus anatinus 39.17 2.00e-145 509.00
IUUC-Ocu-074483 Oryctolagus cuniculus 37.60 4.00e-141 495.00
IUUC-Oba-075361 Oryza barthii 52.92 0.00e+00 3005.00
IUUC-Obr-076854 Oryza brachyantha 56.38 0.00e+00 3358.00
IUUC-Ogl-077620 Oryza glaberrima 65.19 0.00e+00 1416.00
IUUC-Ogu-077973 Oryza glumaepatula 47.03 0.00e+00 1907.00
IUUC-Oin-079746 Oryza indica 51.14 0.00e+00 2969.00
IUUC-Olo-080417 Oryza longistaminata 54.36 0.00e+00 3191.00
IUUC-Ome-081391 Oryza meridionalis 55.16 0.00e+00 3264.00
IUUC-Oni-082062 Oryza nivara 52.79 0.00e+00 2997.00
IUUC-Opu-083178 Oryza punctata 54.70 0.00e+00 3173.00
IUUC-Oru-084803 Oryza rufipogon 52.98 0.00e+00 3009.00
IUUC-Osa-085645 Oryza sativa 67.31 4.00e-105 373.00
IUUC-Ola-087242 Oryzias latipes 38.59 3.00e-147 516.00
IUUC-Olu-087890 Ostreococcus lucimarinus 38.59 1.00e-143 503.00
IUUC-Oga-088409 Otolemur garnettii 38.84 1.00e-148 520.00
IUUC-Oar-089217 Ovis aries 39.06 1.00e-146 514.00
IUUC-Ptr-091015 Pan troglodytes 36.78 1.00e-130 461.00
IUUC-Psi-093570 Pelodiscus sinensis 37.28 5.00e-140 492.00
IUUC-Ppa-095295 Physcomitrella patens 46.35 0.00e+00 2281.00
IUUC-Pfo-096377 Poecilia formosa 38.51 2.00e-142 501.00
IUUC-Pab-098101 Pongo abelii 37.95 1.00e-140 494.00
IUUC-Ppe-101836 Prunus persica 77.62 0.00e+00 3041.00
IUUC-Rno-104971 Rattus norvegicus 38.43 8.00e-146 510.00
IUUC-Sha-107387 Sarcophilus harrisii 38.52 6.00e-146 512.00
IUUC-Smo-108699 Selaginella moellendorffii 34.86 0.00e+00 977.00
IUUC-Sit-110075 Setaria italica 61.72 0.00e+00 2185.00
IUUC-Sly-111033 Solanum lycopersicum 70.45 0.00e+00 2322.00
IUUC-Sar-113411 Sorex araneus 39.83 1.00e-117 417.00
IUUC-Sbi-114049 Sorghum bicolor 53.31 0.00e+00 2062.00
IUUC-Tgu-117304 Taeniopygia guttata 38.05 1.00e-146 515.00
IUUC-Tru-118125 Takifugu rubripes 38.46 4.00e-144 506.00
IUUC-Tni-120641 Tetraodon nigroviridis 30.84 2.00e-133 471.00
IUUC-Tca-121572 Theobroma cacao 75.18 0.00e+00 4786.00
IUUC-Tae-124172 Triticum aestivum 50.75 0.00e+00 2251.00
IUUC-Tur-126212 Triticum urartu 59.64 0.00e+00 1798.00
IUUC-Ttr-128452 Tursiops truncatus 38.85 4.00e-145 510.00
IUUC-Vvi-130860 Vitis vinifera 72.45 0.00e+00 4462.00
IUUC-Xtr-132038 Xenopus tropicalis 36.59 5.00e-133 469.00
IUUC-Xma-133712 Xiphophorus maculatus 37.23 2.00e-143 504.00
Created Date 25-Jun-2017

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