iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114049

Ensembl Protein ID

Sb10g027260.1

UniProt Accession

A0A194YM01; A0A194YM01_SORBI

Genbank Protein ID

KXG20631.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G229700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g027260	Sb10g027260.1	Sb10g027260.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-09	37.1	1779	1809

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           +H+d v+c+a  sd + +++Gs+D t+++W 
   Q: 1779 QHKDVVSCVAVsSDgNVVATGSYDTTVMIWH 1809
           5***********999***************7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MKKSPQHQAW KYGMPQWNEK QIHIGEGRPL PLEGREPPDG NGYAKFNEAM THCTIGTELM 60
PVGDEPISIG FEKTFAFTGQ MGPVYVFSDA LSSEQASQGR SLFSVSTALD NADKNTFEAT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGAAGT CACCACAACA TCAGGCATGG AAATATGGAA TGCCGCAATG GAATGAGAAG 60
CAGATCCACA TCGGGGAAGG GAGGCCTCTA CCGCTGGAGG GGAGAGAGCC GCCCGATGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR000409--BEACH_dom
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000860	Aegilops tauschii	60.20	0.00e+00	2249.00
IUUC-Atr-002998	Amborella trichopoda	51.64	0.00e+00	2034.00
IUUC-Aly-005407	Arabidopsis lyrata	57.75	0.00e+00	1458.00
IUUC-Ath-007674	Arabidopsis thaliana	50.71	0.00e+00	1966.00
IUUC-Bdi-014244	Brachypodium distachyon	71.40	0.00e+00	2753.00
IUUC-Bol-015261	Brassica oleracea	50.90	0.00e+00	1929.00
IUUC-Bra-016877	Brassica rapa	50.71	0.00e+00	1921.00
IUUC-Ete-032481	Echinops telfairi	35.01	8.00e-104	372.00
IUUC-Gma-042772	Glycine max	51.99	0.00e+00	2056.00
IUUC-Hvu-047772	Hordeum vulgare	75.38	0.00e+00	2283.00
IUUC-Lpe-050958	Leersia perrieri	72.95	0.00e+00	2276.00
IUUC-Mtr-058372	Medicago truncatula	52.05	0.00e+00	1979.00
IUUC-Mac-064991	Musa acuminata	58.54	0.00e+00	2268.00
IUUC-Oba-075426	Oryza barthii	68.48	0.00e+00	2680.00
IUUC-Obr-076907	Oryza brachyantha	71.00	0.00e+00	2849.00
IUUC-Ogl-077620	Oryza glaberrima	72.52	0.00e+00	1518.00
IUUC-Ogu-078751	Oryza glumaepatula	71.21	0.00e+00	2227.00
IUUC-Oin-079746	Oryza indica	68.19	0.00e+00	2677.00
IUUC-Olo-080417	Oryza longistaminata	61.13	0.00e+00	2368.00
IUUC-Ome-081931	Oryza meridionalis	67.39	0.00e+00	2643.00
IUUC-Oni-082349	Oryza nivara	70.25	0.00e+00	2779.00
IUUC-Opu-083178	Oryza punctata	61.68	0.00e+00	2356.00
IUUC-Oru-084803	Oryza rufipogon	60.47	0.00e+00	2291.00
IUUC-Osa-085645	Oryza sativa	81.82	1.00e-126	444.00
IUUC-Olu-087890	Ostreococcus lucimarinus	32.76	5.00e-113	400.00
IUUC-Ppa-095295	Physcomitrella patens	39.91	0.00e+00	1451.00
IUUC-Pop-099604	Populus trichocarpa	53.31	0.00e+00	1999.00
IUUC-Ppe-101836	Prunus persica	54.78	0.00e+00	2021.00
IUUC-Smo-108699	Selaginella moellendorffii	46.39	0.00e+00	755.00
IUUC-Sit-110677	Setaria italica	86.26	0.00e+00	3333.00
IUUC-Sly-111033	Solanum lycopersicum	54.86	0.00e+00	1688.00
IUUC-Tca-121572	Theobroma cacao	54.64	0.00e+00	2119.00
IUUC-Tae-124172	Triticum aestivum	68.62	0.00e+00	1783.00
IUUC-Tur-126212	Triticum urartu	75.47	0.00e+00	2243.00
IUUC-Vvi-130860	Vitis vinifera	54.46	0.00e+00	2065.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence