iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078776

Ensembl Protein ID

OGLUM01G05450.1

UniProt Accession

A0A0D9Y424; A0A0D9Y424_9ORYZ

Protein Name

Ubiquitinyl hydrolase 1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM01G05450	OGLUM01G05450.1	OGLUM01G05450.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.30e-38	132.8	333	770
UBD/Alpha-Helix/UBA	1.00e-16	61.5	648	686

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 41   npkepkgellkslqklfeelw........kskkkavsprellkalkkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedksel 126
           +p +p+ +l ++++kl + ++        ++ ++ + pr+++++++++++efs+++qqDa +f+ +l+dq++++                    
   Q: 333  APADPTLDLNMQMTKLAHGMLsgkysvpnQEGQEGIHPRMFKTVIAAKHPEFSSMRQQDALDFFLHLIDQVDQAN------------------- 407
           34788889************76666667688888**************************************988................... PP
   S: 127  sdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke.............................slqdcL 191
                  + +++ ++  + F++ ++++++c++  +vs  + + + lsl++p +e t+ke                              l+ cL
   Q: 408  -------TGNHELNPF-TGFKFIIEERLQCPSG-KVSYNKRSDYILSLNIPLHEATNKEqleafhekkaamdldgkevsneeivrprvPLEACL 492
           .......455555555.67***********985.566566667888888888887777788********************************* PP
   S: 192  esftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts.................. 267
           +sf+ +ee+ +   +y++  ++k++a k+ ++k++P++L+l++ +f + e+++++    kk+++p+ +d+s++ ++                  
   Q: 493  ASFSGAEEVPE---FYSTALNSKTTAIKTAGFKTFPDYLVLQMRKF-VMEAGWVP----KKLDVPDIIDISHMRSKgiqpgeellpegasgdnk 578
           *********96...********************************.66778888....66789*******99999999999999999999888 PP
   S: 268  .....................................................................peekqke.................. 274
                                                                                +     e                  
   Q: 579  aepvhpvasedivsqlasmgfnylhcqkaaistsntgveeamnwllshmddpdindpiskdsqaaeqtvD-----Etsvqtlvsfgfqedvark 667
           8888888888888888888888888888888887777777777777777777777777666655555550.....0555556666666666666 PP
   S: 275  .............................................kkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeev 322
                                                        + +Y+L+a v+H+G s+++GHYva+v + +g+W+ f+DskV ++   + 
   Q: 668  alaasggnieratdwifshpeasssvptdsstsnmedddahipdgSGRYKLMAFVSHMGtSTHCGHYVAHVLK-DGRWVIFNDSKVAAS--VDL 758
           666666666666666666666666667777777888899999999****************************.9***********999..688 PP
   S: 323  leetgstaYvlfYkr 337
            +   + +Y++f++r
   Q: 759  PK---DMGYLYFFQR 770
           88...999**99997 PP

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
           de  ++ lv+ GF ++ a++aL+a+++n+e+A+++++++
   Q: 648  DETSVQTLVSFGFQEDVARKALAASGGNIERATDWIFSH 686
           7999*********************************97 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MDLLRSHLHK VRIPEPGSRI HKDECCVSFD TPRSEGGLYV DMTSFLGFGR EHVAWNYEKS 60
GNPVYLHIVQ RRKPEPDDEA DRPLKKPTLL AIGVEGGFTD QEPEYDEAFE IVILPEFTSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCTGCCCC TACCAATACC AACTTAACCC CTCTTCTTCC ATCTCTAATC TAATCACTCC 60
TCCCCTCTTC CACCCTCCCC CCACCTCGTC GCCTCGCCGT CTCCACCCCC AAAACCCTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR015940--UBA
IPR009060--UBA-like
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50030--UBA
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00627--UBA
PF00443--UCH
PF02148--zf-UBP

SMART

SM00165--UBA
SM00290--ZnF_UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000394	Aegilops tauschii	85.25	0.00e+00	1304.00
IUUC-Aml-002104	Ailuropoda melanoleuca	46.60	0.00e+00	720.00
IUUC-Atr-002580	Amborella trichopoda	70.68	9.00e-167	580.00
IUUC-Apl-003774	Anas platyrhynchos	46.76	0.00e+00	701.00
IUUC-Aca-005368	Anolis carolinensis	48.55	0.00e+00	749.00
IUUC-Aly-005727	Arabidopsis lyrata	67.04	0.00e+00	1095.00
IUUC-Ath-006974	Arabidopsis thaliana	67.29	0.00e+00	1100.00
IUUC-Ago-007890	Ashbya gossypii	27.84	2.00e-69	256.00
IUUC-Acl-008057	Aspergillus clavatus	35.28	2.00e-117	416.00
IUUC-Afl-008547	Aspergillus flavus	34.69	5.00e-104	371.00
IUUC-Afu-008805	Aspergillus fumigatus	33.20	5.00e-100	358.00
IUUC-Ani-009441	Aspergillus nidulans	35.52	8.00e-89	320.00
IUUC-Ang-009720	Aspergillus niger	34.40	1.00e-108	387.00
IUUC-Aor-010111	Aspergillus oryzae	33.66	2.00e-113	402.00
IUUC-Ate-010531	Aspergillus terreus	31.89	4.00e-95	342.00
IUUC-Ame-011470	Astyanax mexicanus	40.98	0.00e+00	636.00
IUUC-Bgr-012183	Blumeria graminis	31.20	2.00e-100	359.00
IUUC-Bta-013179	Bos taurus	46.94	0.00e+00	725.00
IUUC-Bci-013858	Botrytis cinerea	32.76	1.00e-109	390.00
IUUC-Bdi-014904	Brachypodium distachyon	87.66	0.00e+00	1389.00
IUUC-Bol-015536	Brassica oleracea	67.70	0.00e+00	1093.00
IUUC-Bra-017939	Brassica rapa	67.62	0.00e+00	1096.00
IUUC-Cel-018625	Caenorhabditis elegans	32.35	4.00e-109	388.00
IUUC-Cja-019063	Callithrix jacchus	45.89	0.00e+00	714.00
IUUC-Cfa-020976	Canis familiaris	48.25	0.00e+00	737.00
IUUC-Cpo-022265	Cavia porcellus	48.13	0.00e+00	737.00
IUUC-Cre-022640	Chlamydomonas reinhardtii	42.77	7.00e-119	420.00
IUUC-Csa-024078	Chlorocebus sabaeus	41.81	0.00e+00	643.00
IUUC-Cho-024522	Choloepus hoffmanni	35.85	8.00e-127	447.00
IUUC-Cin-025411	Ciona intestinalis	42.72	2.00e-178	619.00
IUUC-Csv-026347	Ciona savignyi	42.53	9.00e-177	613.00
IUUC-Cgl-026667	Colletotrichum gloeosporioides	32.26	1.00e-92	333.00
IUUC-Cne-026831	Cryptococcus neoformans	34.47	3.00e-107	382.00
IUUC-Cme-027335	Cyanidioschyzon merolae	28.21	7.00e-30	125.00
IUUC-Dre-027651	Danio rerio	41.92	0.00e+00	674.00
IUUC-Dno-029034	Dasypus novemcinctus	47.18	0.00e+00	731.00
IUUC-Dor-030130	Dipodomys ordii	37.18	8.00e-101	360.00
IUUC-Dse-031467	Dothistroma septosporum	33.78	8.00e-112	397.00
IUUC-Dme-032075	Drosophila melanogaster	43.46	0.00e+00	633.00
IUUC-Ete-032865	Echinops telfairi	44.43	0.00e+00	659.00
IUUC-Eca-034059	Equus caballus	46.96	0.00e+00	725.00
IUUC-Eeu-035304	Erinaceus europaeus	44.47	0.00e+00	645.00
IUUC-Fca-035515	Felis catus	46.94	0.00e+00	729.00
IUUC-Fal-037271	Ficedula albicollis	48.29	0.00e+00	689.00
IUUC-Fox-037745	Fusarium oxysporum	33.50	5.00e-110	391.00
IUUC-Fso-038158	Fusarium solani	32.39	2.00e-105	376.00
IUUC-Gmo-039071	Gadus morhua	43.37	0.00e+00	628.00
IUUC-Ggr-040098	Gaeumannomyces graminis	31.62	1.00e-100	360.00
IUUC-Gga-040635	Gallus gallus	47.30	0.00e+00	745.00
IUUC-Gac-042528	Gasterosteus aculeatus	42.67	0.00e+00	643.00
IUUC-Gma-043614	Glycine max	66.38	0.00e+00	1070.00
IUUC-Ggo-044602	Gorilla gorilla	47.06	0.00e+00	729.00
IUUC-Hsa-045959	Homo sapiens	47.06	0.00e+00	729.00
IUUC-Hvu-047563	Hordeum vulgare	83.02	0.00e+00	1050.00
IUUC-Itr-048712	Ictidomys tridecemlineatus	46.59	0.00e+00	732.00
IUUC-Kpa-049156	Komagataella pastoris	31.14	4.00e-102	365.00
IUUC-Lch-049648	Latimeria chalumnae	47.88	0.00e+00	733.00
IUUC-Lpe-051523	Leersia perrieri	93.01	0.00e+00	1506.00
IUUC-Loc-052072	Lepisosteus oculatus	42.62	0.00e+00	645.00
IUUC-Lma-053216	Leptosphaeria maculans	33.75	2.00e-104	374.00
IUUC-Laf-054327	Loxodonta africana	47.06	0.00e+00	731.00
IUUC-Mcc-055443	Macaca mulatta	46.94	0.00e+00	724.00
IUUC-Meu-056298	Macropus eugenii	50.00	3.00e-149	521.00
IUUC-Mor-057106	Magnaporthe oryzae	32.72	8.00e-110	390.00
IUUC-Mpo-057589	Magnaporthe poae	32.40	1.00e-102	367.00
IUUC-Mtr-058680	Medicago truncatula	66.50	0.00e+00	1102.00
IUUC-Mla-058903	Melampsora laricipopulina	32.17	2.00e-98	352.00
IUUC-Mga-059669	Meleagris gallopavo	46.73	0.00e+00	694.00
IUUC-Mvi-060476	Microbotryum violaceum	32.46	8.00e-97	347.00
IUUC-Mmr-060575	Microcebus murinus	47.18	0.00e+00	726.00
IUUC-Mdo-062183	Monodelphis domestica	47.43	0.00e+00	730.00
IUUC-Mmu-063592	Mus musculus	47.29	0.00e+00	733.00
IUUC-Mac-065634	Musa acuminata	72.42	0.00e+00	638.00
IUUC-Mpu-066082	Mustela putorius furo	48.25	0.00e+00	729.00
IUUC-Mlu-067345	Myotis lucifugus	46.24	0.00e+00	719.00
IUUC-Nfi-068558	Neosartorya fischeri	34.86	2.00e-112	399.00
IUUC-Ncr-068960	Neurospora crassa	30.34	9.00e-93	334.00
IUUC-Nle-070173	Nomascus leucogenys	48.25	0.00e+00	736.00
IUUC-Opr-070556	Ochotona princeps	46.82	0.00e+00	738.00
IUUC-Ont-071502	Oreochromis niloticus	45.14	0.00e+00	652.00
IUUC-Oan-072959	Ornithorhynchus anatinus	51.33	2.00e-62	231.00
IUUC-Ocu-074861	Oryctolagus cuniculus	48.00	0.00e+00	744.00
IUUC-Oba-075109	Oryza barthii	99.10	0.00e+00	1575.00
IUUC-Obr-076292	Oryza brachyantha	91.95	0.00e+00	1427.00
IUUC-Ogl-077065	Oryza glaberrima	96.85	0.00e+00	1566.00
IUUC-Oin-080048	Oryza indica	96.47	0.00e+00	1539.00
IUUC-Olo-080711	Oryza longistaminata	96.80	0.00e+00	1452.00
IUUC-Ome-081506	Oryza meridionalis	99.05	0.00e+00	1464.00
IUUC-Oni-082320	Oryza nivara	96.37	0.00e+00	1567.00
IUUC-Opu-083801	Oryza punctata	97.42	0.00e+00	1503.00
IUUC-Oru-085139	Oryza rufipogon	96.24	0.00e+00	1563.00
IUUC-Osa-085713	Oryza sativa	96.85	0.00e+00	1568.00
IUUC-Ola-086951	Oryzias latipes	42.12	0.00e+00	627.00
IUUC-Olu-087822	Ostreococcus lucimarinus	40.44	6.00e-161	560.00
IUUC-Oga-088625	Otolemur garnettii	46.05	0.00e+00	719.00
IUUC-Oar-089995	Ovis aries	46.06	0.00e+00	717.00
IUUC-Ptr-090640	Pan troglodytes	46.12	0.00e+00	726.00
IUUC-Pan-091974	Papio anubis	46.13	0.00e+00	718.00
IUUC-Psi-093957	Pelodiscus sinensis	47.07	0.00e+00	751.00
IUUC-Pma-094242	Petromyzon marinus	44.16	5.00e-90	323.00
IUUC-Pno-094835	Phaeosphaeria nodorum	36.39	8.00e-97	347.00
IUUC-Ppa-095901	Physcomitrella patens	60.29	0.00e+00	994.00
IUUC-Pfo-097148	Poecilia formosa	44.30	0.00e+00	647.00
IUUC-Pab-098672	Pongo abelii	41.28	1.00e-176	612.00
IUUC-Pop-098943	Populus trichocarpa	70.40	0.00e+00	1117.00
IUUC-Pca-100738	Procavia capensis	43.45	7.00e-133	467.00
IUUC-Ppe-101315	Prunus persica	68.40	0.00e+00	1101.00
IUUC-Pva-102154	Pteropus vampyrus	46.59	0.00e+00	720.00
IUUC-Pgr-103343	Puccinia graminis	32.41	2.00e-92	332.00
IUUC-Ptt-103928	Puccinia triticina	30.47	3.00e-90	325.00
IUUC-Pte-104306	Pyrenophora teres	32.93	2.00e-93	336.00
IUUC-Pyt-104696	Pyrenophora triticirepentis	33.33	7.00e-96	344.00
IUUC-Rno-105801	Rattus norvegicus	47.29	0.00e+00	735.00
IUUC-Sce-106304	Saccharomyces cerevisiae	30.14	4.00e-69	255.00
IUUC-Sha-107635	Sarcophilus harrisii	48.31	0.00e+00	731.00
IUUC-Sja-107678	Schizosaccharomyces japonicus	31.77	3.00e-90	325.00
IUUC-Spo-108144	Schizosaccharomyces pombe	32.47	2.00e-106	379.00
IUUC-Smo-108848	Selaginella moellendorffii	58.61	0.00e+00	902.00
IUUC-Sit-110728	Setaria italica	87.03	0.00e+00	1410.00
IUUC-Sly-111523	Solanum lycopersicum	65.47	0.00e+00	1102.00
IUUC-Stu-112498	Solanum tuberosum	61.76	3.00e-07	49.70
IUUC-Sar-113733	Sorex araneus	43.73	2.00e-85	309.00
IUUC-Sbi-114419	Sorghum bicolor	87.03	0.00e+00	1398.00
IUUC-Sre-115225	Sporisorium reilianum	32.94	2.00e-99	356.00
IUUC-Ssc-115686	Sus scrofa	46.00	0.00e+00	724.00
IUUC-Tgu-117346	Taeniopygia guttata	47.13	0.00e+00	726.00
IUUC-Tru-118350	Takifugu rubripes	42.11	0.00e+00	629.00
IUUC-Tsy-119278	Tarsius syrichta	38.43	2.00e-156	545.00
IUUC-Tni-120658	Tetraodon nigroviridis	42.27	5.00e-178	617.00
IUUC-Tca-121585	Theobroma cacao	68.73	0.00e+00	1098.00
IUUC-Tre-122043	Trichoderma reesei	34.44	4.00e-107	382.00
IUUC-Tvi-122303	Trichoderma virens	34.56	8.00e-106	377.00
IUUC-Tae-123798	Triticum aestivum	85.77	0.00e+00	1392.00
IUUC-Tur-126732	Triticum urartu	84.95	0.00e+00	1355.00
IUUC-Tme-126909	Tuber melanosporum	33.13	1.00e-96	346.00
IUUC-Tbe-127261	Tupaia belangeri	39.20	6.00e-109	388.00
IUUC-Ttr-129119	Tursiops truncatus	51.50	2.00e-102	366.00
IUUC-Uma-129599	Ustilago maydis	32.98	4.00e-108	385.00
IUUC-Vda-129688	Verticillium dahliae	32.71	2.00e-101	362.00
IUUC-Vpa-130170	Vicugna pacos	35.61	6.00e-134	471.00
IUUC-Vvi-131116	Vitis vinifera	70.49	0.00e+00	1104.00
IUUC-Xtr-131953	Xenopus tropicalis	44.69	0.00e+00	683.00
IUUC-Xma-133837	Xiphophorus maculatus	44.18	0.00e+00	645.00
IUUC-Yli-134510	Yarrowia lipolytica	32.83	4.00e-105	375.00
IUUC-Zma-135786	Zea mays	84.89	0.00e+00	1332.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence