iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ome-081506

Ensembl Protein ID

OMERI01G05000.1

UniProt Accession

A0A0E0BY01; A0A0E0BY01_9ORYZ

Protein Name

Ubiquitinyl hydrolase 1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OMERI01G05000	OMERI01G05000.1	OMERI01G05000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.10e-42	145.9	292	733
UBD/Alpha-Helix/UBA	8.40e-17	61.7	611	649

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 41   npkepkgellkslqklfeelw........kskkkavsprellkalkkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedksel 126
           +p +p+ +l ++++kl + ++        ++ ++ + pr+++++++++++efs+++qqDa +f+ +l+dq++++                    
   Q: 292  APADPTLDLNMQMTKLAHGMLsgkhsvpnQEGQEGIRPRMFKTVIAAKHPEFSSMRQQDALDFFLHLIDQVDQAN------------------- 366
           34788889************75555556577777**************************************988................... PP
   S: 127  sdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke.............................slqdcL 191
                  + +++ ++  + F++ ++++++c++  +vs  + + + lsl++p +e t+ke                              l+ cL
   Q: 367  -------TGNHELNPF-TGFKFIIEERLQCPSG-KVSYNKRSDYILSLNIPLHEATNKEqleafhekkaamdldgkevsneeivrprvPLEACL 451
           .......455555555.67***********985.566566667888888888887777788********************************* PP
   S: 192  esftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts.................. 267
           +sf+ +ee+ +   +y++  ++k++a k+ ++k++P++L+l++ +f + e++++++k++ +v++p+ +d+s++ ++                  
   Q: 452  ASFSGAEEVPE---FYSTALNSKTTAIKTAGFKTFPDYLVLQMRKF-VMEAGWVPKKLDVYVDVPDIIDISHMRSKgiqpgeellpegasgdnk 541
           *********96...********************************.77889*******************99999999999999999999888 PP
   S: 268  .....................................................................peekqke.................. 274
                                                                                +     e                  
   Q: 542  aepvhpvasedivsqlasmgfnylhcqkaaistsntgveeamnwllshmddpdindpiskdsqaaeqtvD-----Etsvqtlvsfgfqedvark 630
           8888888888888888888888888888888887777777777777777777777777666655555550.....0555555666666666666 PP
   S: 275  .............................................kkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeev 322
                                                        + +Y+L+a v+H+G s+++GHYva+v + +g+W+ f+DskV ++   + 
   Q: 631  alaasggnieratdwifshpeasssvptdsstsnmedddahipdgSGRYKLMAFVSHMGtSTHCGHYVAHVLK-DGRWVIFNDSKVAAS--VDL 721
           666666666666666666666666667777777888899999999****************************.9***********999..688 PP
   S: 323  leetgstaYvlfYkr 337
            +   + +Y++f++r
   Q: 722  PK---DMGYLYFFQR 733
           88...999**99997 PP

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
           de  ++ lv+ GF ++ a++aL+a+++n+e+A+++++++
   Q: 611  DETSVQTLVSFGFQEDVARKALAASGGNIERATDWIFSH 649
           7999*********************************97 PP

Organism

Oryza meridionalis

Protein Sequence
(Fasta)

MTSFLGFGRE HVAWNYEKSG NPVYLHIVQR RKPEPDDEAD RPLKKPTLLA IGVEGGFTDQ 60
ELEYDEAFEI VILPEFTSLP FPSIDLPEKV RIAVDKVILA ESADRKQQLA SWVADKKKVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACCCACCCA CCCACCCACC CACGCCTTGT CCCTCACCTC GCTCTGGTCT CCTAGGGTTA 60
GGGTTTTGAC GCCGATTTCG CCGTGCAGAG GTCGGAGGGT GGGCTGTACG TCGACATGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR015940--UBA
IPR009060--UBA-like
IPR016652--Ubiquitinyl_hydrolase
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50030--UBA
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00627--UBA
PF00443--UCH
PF02148--zf-UBP

SMART

SM00165--UBA
SM00290--ZnF_UBP

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000394	Aegilops tauschii	84.74	0.00e+00	1288.00
IUUC-Aml-002104	Ailuropoda melanoleuca	45.84	0.00e+00	680.00
IUUC-Atr-002580	Amborella trichopoda	71.22	1.00e-167	582.00
IUUC-Apl-003774	Anas platyrhynchos	46.56	0.00e+00	703.00
IUUC-Aca-005368	Anolis carolinensis	48.23	0.00e+00	708.00
IUUC-Aly-005727	Arabidopsis lyrata	66.84	0.00e+00	1026.00
IUUC-Ath-006974	Arabidopsis thaliana	67.10	0.00e+00	1031.00
IUUC-Ago-007890	Ashbya gossypii	27.78	6.00e-68	251.00
IUUC-Acl-008057	Aspergillus clavatus	35.58	8.00e-118	417.00
IUUC-Afl-008547	Aspergillus flavus	34.83	1.00e-104	372.00
IUUC-Afu-008805	Aspergillus fumigatus	33.33	4.00e-100	358.00
IUUC-Ani-009441	Aspergillus nidulans	36.85	1.00e-89	323.00
IUUC-Ang-009720	Aspergillus niger	34.46	7.00e-103	367.00
IUUC-Aor-010111	Aspergillus oryzae	34.15	1.00e-108	386.00
IUUC-Ate-010531	Aspergillus terreus	32.68	4.00e-90	325.00
IUUC-Ame-011470	Astyanax mexicanus	41.03	1.00e-174	606.00
IUUC-Bgr-012183	Blumeria graminis	31.88	8.00e-96	344.00
IUUC-Bta-013179	Bos taurus	46.20	0.00e+00	686.00
IUUC-Bci-013858	Botrytis cinerea	33.03	9.00e-104	370.00
IUUC-Bdi-014904	Brachypodium distachyon	87.65	0.00e+00	1309.00
IUUC-Bol-015536	Brassica oleracea	67.67	0.00e+00	1031.00
IUUC-Bra-017939	Brassica rapa	67.59	0.00e+00	1033.00
IUUC-Cel-018625	Caenorhabditis elegans	32.23	4.00e-104	371.00
IUUC-Cja-019063	Callithrix jacchus	45.11	0.00e+00	676.00
IUUC-Cfa-020976	Canis familiaris	47.54	0.00e+00	697.00
IUUC-Cpo-022265	Cavia porcellus	47.42	0.00e+00	696.00
IUUC-Cre-022640	Chlamydomonas reinhardtii	43.24	2.00e-122	431.00
IUUC-Csa-024078	Chlorocebus sabaeus	41.41	3.00e-174	604.00
IUUC-Cho-024522	Choloepus hoffmanni	35.45	2.00e-125	442.00
IUUC-Cin-025411	Ciona intestinalis	42.42	3.00e-171	594.00
IUUC-Csv-026347	Ciona savignyi	42.02	1.00e-167	582.00
IUUC-Cgl-026667	Colletotrichum gloeosporioides	33.04	8.00e-90	324.00
IUUC-Cne-026831	Cryptococcus neoformans	34.94	5.00e-106	378.00
IUUC-Cme-027335	Cyanidioschyzon merolae	30.69	6.00e-27	115.00
IUUC-Dre-027651	Danio rerio	41.77	0.00e+00	640.00
IUUC-Dno-029034	Dasypus novemcinctus	46.45	0.00e+00	691.00
IUUC-Dor-030130	Dipodomys ordii	39.60	3.00e-82	299.00
IUUC-Dse-031467	Dothistroma septosporum	34.33	7.00e-106	377.00
IUUC-Dme-032075	Drosophila melanogaster	43.53	1.00e-175	609.00
IUUC-Ete-032865	Echinops telfairi	43.56	2.00e-177	615.00
IUUC-Eca-034059	Equus caballus	46.20	0.00e+00	682.00
IUUC-Eeu-035304	Erinaceus europaeus	46.64	0.00e+00	640.00
IUUC-Fca-035515	Felis catus	46.20	0.00e+00	688.00
IUUC-Fal-037271	Ficedula albicollis	48.17	0.00e+00	698.00
IUUC-Fox-037745	Fusarium oxysporum	34.16	3.00e-106	378.00
IUUC-Fso-038158	Fusarium solani	32.77	7.00e-101	360.00
IUUC-Gmo-039071	Gadus morhua	42.79	3.00e-168	585.00
IUUC-Ggr-040098	Gaeumannomyces graminis	31.82	1.00e-96	347.00
IUUC-Gga-040635	Gallus gallus	46.68	0.00e+00	705.00
IUUC-Gac-042528	Gasterosteus aculeatus	42.05	1.00e-172	599.00
IUUC-Gma-043614	Glycine max	66.15	0.00e+00	1004.00
IUUC-Ggo-044602	Gorilla gorilla	46.32	0.00e+00	690.00
IUUC-Hsa-045959	Homo sapiens	46.32	0.00e+00	690.00
IUUC-Hvu-047563	Hordeum vulgare	83.49	0.00e+00	1056.00
IUUC-Itr-048712	Ictidomys tridecemlineatus	45.83	0.00e+00	692.00
IUUC-Kpa-049156	Komagataella pastoris	32.72	3.00e-96	345.00
IUUC-Lch-049648	Latimeria chalumnae	46.78	0.00e+00	693.00
IUUC-Lpe-051523	Leersia perrieri	93.16	0.00e+00	1422.00
IUUC-Loc-052072	Lepisosteus oculatus	42.38	4.00e-176	610.00
IUUC-Lma-053216	Leptosphaeria maculans	34.47	7.00e-99	355.00
IUUC-Laf-054327	Loxodonta africana	46.32	0.00e+00	691.00
IUUC-Mcc-055443	Macaca mulatta	46.20	0.00e+00	685.00
IUUC-Meu-056298	Macropus eugenii	48.90	7.00e-135	474.00
IUUC-Mor-057106	Magnaporthe oryzae	33.38	1.00e-104	373.00
IUUC-Mpo-057589	Magnaporthe poae	32.86	2.00e-98	353.00
IUUC-Mtr-058680	Medicago truncatula	66.67	0.00e+00	1037.00
IUUC-Mla-058903	Melampsora laricipopulina	32.64	2.00e-94	339.00
IUUC-Mga-059669	Meleagris gallopavo	46.58	0.00e+00	690.00
IUUC-Mvi-060476	Microbotryum violaceum	33.76	8.00e-94	337.00
IUUC-Mmr-060575	Microcebus murinus	46.45	0.00e+00	687.00
IUUC-Mdo-062183	Monodelphis domestica	46.58	0.00e+00	689.00
IUUC-Mmu-063592	Mus musculus	46.57	0.00e+00	693.00
IUUC-Mac-065634	Musa acuminata	76.49	6.00e-164	570.00
IUUC-Mpu-066082	Mustela putorius furo	47.54	0.00e+00	689.00
IUUC-Mlu-067345	Myotis lucifugus	45.48	0.00e+00	679.00
IUUC-Nfi-068558	Neosartorya fischeri	34.99	1.00e-112	400.00
IUUC-Ncr-068960	Neurospora crassa	30.49	2.00e-88	319.00
IUUC-Nle-070173	Nomascus leucogenys	47.54	0.00e+00	695.00
IUUC-Opr-070556	Ochotona princeps	46.08	0.00e+00	698.00
IUUC-Ont-071502	Oreochromis niloticus	44.51	6.00e-175	607.00
IUUC-Oan-072959	Ornithorhynchus anatinus	50.88	8.00e-62	229.00
IUUC-Ocu-074861	Oryctolagus cuniculus	47.29	0.00e+00	704.00
IUUC-Oba-075109	Oryza barthii	99.32	0.00e+00	1488.00
IUUC-Obr-076292	Oryza brachyantha	92.18	0.00e+00	1345.00
IUUC-Ogl-077065	Oryza glaberrima	96.95	0.00e+00	1477.00
IUUC-Ogu-078776	Oryza glumaepatula	99.05	0.00e+00	1483.00
IUUC-Oin-080048	Oryza indica	96.41	0.00e+00	1446.00
IUUC-Olo-080711	Oryza longistaminata	97.20	0.00e+00	1455.00
IUUC-Oni-082320	Oryza nivara	96.30	0.00e+00	1475.00
IUUC-Opu-083801	Oryza punctata	97.82	0.00e+00	1417.00
IUUC-Oru-085139	Oryza rufipogon	96.17	0.00e+00	1470.00
IUUC-Osa-085713	Oryza sativa	96.81	0.00e+00	1476.00
IUUC-Ola-086951	Oryzias latipes	41.93	8.00e-168	583.00
IUUC-Olu-087822	Ostreococcus lucimarinus	40.79	1.00e-155	542.00
IUUC-Oga-088625	Otolemur garnettii	45.28	0.00e+00	679.00
IUUC-Oar-089995	Ovis aries	45.29	0.00e+00	677.00
IUUC-Ptr-090640	Pan troglodytes	45.34	0.00e+00	686.00
IUUC-Pan-091974	Papio anubis	45.35	0.00e+00	678.00
IUUC-Psi-093957	Pelodiscus sinensis	46.57	0.00e+00	712.00
IUUC-Pma-094242	Petromyzon marinus	44.16	3.00e-92	331.00
IUUC-Pno-094835	Phaeosphaeria nodorum	36.39	1.00e-95	343.00
IUUC-Ppa-095901	Physcomitrella patens	59.62	0.00e+00	934.00
IUUC-Pfo-097148	Poecilia formosa	43.95	4.00e-174	604.00
IUUC-Pab-098672	Pongo abelii	40.83	6.00e-165	573.00
IUUC-Pop-098943	Populus trichocarpa	70.12	0.00e+00	1045.00
IUUC-Pca-100738	Procavia capensis	43.28	1.00e-134	473.00
IUUC-Ppe-101315	Prunus persica	68.14	0.00e+00	1027.00
IUUC-Pva-102154	Pteropus vampyrus	45.71	0.00e+00	676.00
IUUC-Pgr-103343	Puccinia graminis	32.03	9.00e-85	307.00
IUUC-Ptt-103928	Puccinia triticina	30.06	9.00e-83	300.00
IUUC-Pte-104306	Pyrenophora teres	34.88	3.00e-88	318.00
IUUC-Pyt-104696	Pyrenophora triticirepentis	35.49	4.00e-92	332.00
IUUC-Rno-105801	Rattus norvegicus	46.57	0.00e+00	694.00
IUUC-Sce-106304	Saccharomyces cerevisiae	30.29	3.00e-70	259.00
IUUC-Sha-107635	Sarcophilus harrisii	47.47	0.00e+00	690.00
IUUC-Sja-107678	Schizosaccharomyces japonicus	31.99	4.00e-88	318.00
IUUC-Spo-108144	Schizosaccharomyces pombe	33.16	8.00e-101	360.00
IUUC-Smo-108848	Selaginella moellendorffii	58.73	0.00e+00	861.00
IUUC-Sit-110728	Setaria italica	86.85	0.00e+00	1337.00
IUUC-Sly-111523	Solanum lycopersicum	65.45	0.00e+00	1046.00
IUUC-Stu-112498	Solanum tuberosum	61.76	3.00e-07	49.70
IUUC-Sar-113733	Sorex araneus	42.61	3.00e-81	295.00
IUUC-Sbi-114419	Sorghum bicolor	86.85	0.00e+00	1325.00
IUUC-Sre-115225	Sporisorium reilianum	32.80	2.00e-94	340.00
IUUC-Ssc-115686	Sus scrofa	45.22	0.00e+00	684.00
IUUC-Tgu-117346	Taeniopygia guttata	46.75	0.00e+00	686.00
IUUC-Tru-118350	Takifugu rubripes	41.36	4.00e-168	584.00
IUUC-Tsy-119278	Tarsius syrichta	37.95	6.00e-155	540.00
IUUC-Tni-120658	Tetraodon nigroviridis	41.65	4.00e-165	574.00
IUUC-Tca-121585	Theobroma cacao	68.75	0.00e+00	1030.00
IUUC-Tre-122043	Trichoderma reesei	33.51	7.00e-101	360.00
IUUC-Tvi-122303	Trichoderma virens	33.90	4.00e-100	358.00
IUUC-Tae-123798	Triticum aestivum	85.79	0.00e+00	1313.00
IUUC-Tur-126732	Triticum urartu	84.60	0.00e+00	1280.00
IUUC-Tme-126909	Tuber melanosporum	33.38	2.00e-92	333.00
IUUC-Tbe-127261	Tupaia belangeri	39.04	1.00e-110	393.00
IUUC-Ttr-129119	Tursiops truncatus	50.45	1.00e-88	320.00
IUUC-Uma-129599	Ustilago maydis	33.41	2.00e-104	372.00
IUUC-Vda-129688	Verticillium dahliae	32.98	1.00e-97	350.00
IUUC-Vpa-130170	Vicugna pacos	35.34	2.00e-134	472.00
IUUC-Vvi-131116	Vitis vinifera	70.48	0.00e+00	1036.00
IUUC-Xtr-131953	Xenopus tropicalis	44.68	0.00e+00	651.00
IUUC-Xma-133837	Xiphophorus maculatus	43.83	2.00e-173	602.00
IUUC-Yli-134510	Yarrowia lipolytica	33.33	2.00e-96	346.00
IUUC-Zma-135786	Zea mays	84.59	0.00e+00	1259.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence