iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000015532.4	ENSXETT00000065498.1	ENSXETP00000059566.1
ENSXETG00000015532.4	ENSXETT00000033877.4	ENSXETP00000033877.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	9.80e-07	29.1	45	138

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 59   prqpprgps..aaakpkaglrseaaaapapapaptp......tpeegpdaglldrlpeeilveilklldkeellraarvcrrwqelasq 139
             qpp  ps  + a pk     + ++ p   p pt       +pee p+ ++   l+e+il + + + ++ e++ +a+vc++w+++  q
   Q: 45   LCQPPSVPSilSQAFPKHAEHVNPSTLPILPPPPTHsiplglSPEESPEMNWHLALDEKILTRLFCYFSACEKCILAQVCKTWRRVLYQ 133
           4699999993336789999999999999888888752224446*****************************************99999 PP
   S: 140  kalwk 144
           +++w 
   Q: 134  SRFWL 138
           99996 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MSNTSNRDTK TQCLPRNGLV KIPSPTNGLG SASITKGTPA VKNRLCQPPS VPSILSQAFP 60
KHAEHVNPST LPILPPPPTH SIPLGLSPEE SPEMNWHLAL DEKILTRLFC YFSACEKCIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAACGTTA GAACCATGTC TAACACAAGC AACAGAGACA CCAAAACCCA ATGTCTACCG 60
CGTAATGGGC TGGTGAAGAT TCCTTCTCCC ACCAACGGCC TGGGCTCGGC CAGTATTACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR006553--Leu-rich_rpt_Cys-con_subtyp

Pfam

PF00646--F-box
PF13516--LRR_6

SMART

SM00367--LRR_CC

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cre-022929	Chlamydomonas reinhardtii	29.71	3.00e-04	39.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence