iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131243

UUCD1 version

UUC-ViV-00635

Ensembl Protein ID

VIT_13s0067g01460.t01

UniProt Accession

F6HCB0; F6HCB0_VITVI

Genbank Protein ID

CCB49848.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN595514

Gene Name

VIT_13s0067g01460

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_13s0067g01460	VIT_13s0067g01460.t01	VIT_13s0067g01460.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-31	108.9	282	354

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ef+CpIsl+lMrdPv+++sG+tydr+sI++w+++g++tcP+ + +l +  l+Pn++l++l+++wc en++
   Q: 282  IPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINTGHNTCPKSGMKLIHMALIPNYALKSLVHQWCRENNI 354
           8*********************************************************************986 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MDVALPTLMV SSGFLPTGSL LESLIHISNE VASMERLPVI QVRNISTMIR RIKLLSSLFE 60
EIHEMNTPLP PSSILCLTEL FSVIRRVKSF IQGCKDASSL WSLVQTELIS SQFHVVVKEM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGTTG CTCTTCCTAC TCTCATGGTC TCTTCGGGCT TTCTTCCAAC AGGGTCATTG 60
CTAGAATCAT TGATACACAT ATCTAATGAA GTTGCATCAA TGGAAAGGCT TCCTGTTATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100246680

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002723	Amborella trichopoda	52.09	3.00e-165	574.00
IUUC-Cel-018336	Caenorhabditis elegans	32.03	1.00e-10	61.60
IUUC-Gma-042912	Glycine max	67.68	0.00e+00	743.00
IUUC-Mtr-058278	Medicago truncatula	71.20	0.00e+00	884.00
IUUC-Olu-087884	Ostreococcus lucimarinus	50.75	4.00e-23	98.20
IUUC-Ppa-095502	Physcomitrella patens	46.59	1.00e-150	526.00
IUUC-Pop-099478	Populus trichocarpa	79.51	0.00e+00	957.00
IUUC-Ppe-101201	Prunus persica	78.55	0.00e+00	991.00
IUUC-Smo-109110	Selaginella moellendorffii	45.14	1.00e-147	516.00
IUUC-Sly-111580	Solanum lycopersicum	71.33	0.00e+00	747.00
IUUC-Stu-112508	Solanum tuberosum	71.43	0.00e+00	885.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence