iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114474

Ensembl Protein ID

Sb04g021350.1

UniProt Accession

C5XTB5; C5XTB5_SORBI

Genbank Protein ID

EES06890.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G161600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g021350	Sb04g021350.1	Sb04g021350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.40e-15	55.3	214	245

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrt 32
           H  +v+++a+ + + ++s s Dg+++v+Dlr+
   Q: 214  HDKEVYDIAWGGaGVFASVSADGSVRVFDLRD 245
           8899******55699**************987 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGGAGEGDAW ADQEQGNGGG SRGVGGGGGG EAKRSEIYTY EAAWHIYAMN WSVRRDKKYR 60
LAIASLLEQV TNRVEVVQLD EASGDIAPVL TFDHQYPPTK TMFMPDPHAL RPDLLATSAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCAGTCGTC TCGTTTCCTC TCTTCCCCTC AACTGACAGA AACCCCCAAA TCCGCTCCCT 60
TCCCCTATCC ACCTCGACTC CCTTCCTTCC ATAGCAGCGG CAGCGGCGGC GGCGGCGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

sbi:SORBI_04g021350

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000420	Aegilops tauschii	52.00	1.00e-29	120.00
IUUC-Aml-002310	Ailuropoda melanoleuca	49.03	3.00e-88	317.00
IUUC-Atr-002576	Amborella trichopoda	68.04	1.00e-147	514.00
IUUC-Apl-003746	Anas platyrhynchos	49.03	3.00e-88	317.00
IUUC-Aca-005293	Anolis carolinensis	50.25	2.00e-105	374.00
IUUC-Aly-006500	Arabidopsis lyrata	68.81	8.00e-148	515.00
IUUC-Ath-006739	Arabidopsis thaliana	68.56	2.00e-147	513.00
IUUC-Ago-007732	Ashbya gossypii	31.67	4.00e-39	154.00
IUUC-Acl-008299	Aspergillus clavatus	35.88	6.00e-38	151.00
IUUC-Afl-008470	Aspergillus flavus	35.61	3.00e-34	139.00
IUUC-Afu-008896	Aspergillus fumigatus	35.82	3.00e-34	139.00
IUUC-Ang-009687	Aspergillus niger	35.59	4.00e-39	155.00
IUUC-Aor-010198	Aspergillus oryzae	35.09	7.00e-34	137.00
IUUC-Ate-010363	Aspergillus terreus	35.28	3.00e-32	132.00
IUUC-Ame-010643	Astyanax mexicanus	44.94	1.00e-87	315.00
IUUC-Bgr-012055	Blumeria graminis	36.76	8.00e-41	161.00
IUUC-Bta-013199	Bos taurus	50.25	3.00e-105	374.00
IUUC-Bci-013840	Botrytis cinerea	36.52	2.00e-39	156.00
IUUC-Bdi-014374	Brachypodium distachyon	87.69	2.00e-173	600.00
IUUC-Bra-017922	Brassica rapa	67.78	1.00e-144	505.00
IUUC-Cel-018487	Caenorhabditis elegans	44.28	7.00e-91	327.00
IUUC-Cja-018736	Callithrix jacchus	50.25	3.00e-105	374.00
IUUC-Cfa-020446	Canis familiaris	50.25	3.00e-105	374.00
IUUC-Cpo-022424	Cavia porcellus	50.25	3.00e-105	374.00
IUUC-Cre-022609	Chlamydomonas reinhardtii	60.10	7.00e-122	429.00
IUUC-Csa-024013	Chlorocebus sabaeus	48.91	2.00e-90	326.00
IUUC-Cho-024507	Choloepus hoffmanni	49.44	3.00e-88	317.00
IUUC-Cin-025620	Ciona intestinalis	49.38	2.00e-104	371.00
IUUC-Csv-026111	Ciona savignyi	49.12	5.00e-104	369.00
IUUC-Cgl-026588	Colletotrichum gloeosporioides	36.31	4.00e-41	161.00
IUUC-Dre-027940	Danio rerio	50.75	9.00e-106	375.00
IUUC-Dno-029520	Dasypus novemcinctus	50.25	3.00e-105	374.00
IUUC-Dor-030262	Dipodomys ordii	53.04	5.00e-29	120.00
IUUC-Dse-031207	Dothistroma septosporum	34.93	9.00e-32	130.00
IUUC-Dme-031639	Drosophila melanogaster	49.50	5.00e-105	373.00
IUUC-Ete-032605	Echinops telfairi	42.82	7.00e-77	279.00
IUUC-Eca-033668	Equus caballus	47.63	3.00e-92	330.00
IUUC-Fca-035942	Felis catus	50.25	3.00e-105	374.00
IUUC-Fal-037544	Ficedula albicollis	50.25	3.00e-105	374.00
IUUC-Fox-037852	Fusarium oxysporum	37.20	2.00e-42	166.00
IUUC-Fso-038173	Fusarium solani	36.69	4.00e-42	164.00
IUUC-Gmo-038850	Gadus morhua	50.25	3.00e-105	374.00
IUUC-Ggr-040072	Gaeumannomyces graminis	36.83	5.00e-39	154.00
IUUC-Gga-040439	Gallus gallus	50.25	3.00e-105	374.00
IUUC-Gac-041776	Gasterosteus aculeatus	50.00	6.00e-105	372.00
IUUC-Gma-043558	Glycine max	69.07	1.00e-148	518.00
IUUC-Ggo-044490	Gorilla gorilla	50.25	3.00e-105	374.00
IUUC-Hsa-046015	Homo sapiens	50.25	3.00e-105	374.00
IUUC-Hvu-047667	Hordeum vulgare	84.22	9.00e-170	588.00
IUUC-Itr-048428	Ictidomys tridecemlineatus	50.25	3.00e-105	374.00
IUUC-Kpa-049347	Komagataella pastoris	29.57	4.00e-36	144.00
IUUC-Lch-049754	Latimeria chalumnae	50.25	2.00e-105	374.00
IUUC-Lpe-050741	Leersia perrieri	86.34	2.00e-178	617.00
IUUC-Loc-052351	Lepisosteus oculatus	50.00	2.00e-103	367.00
IUUC-Lma-053005	Leptosphaeria maculans	36.26	8.00e-38	151.00
IUUC-Laf-054077	Loxodonta africana	50.25	3.00e-105	374.00
IUUC-Mcc-055728	Macaca mulatta	50.25	3.00e-105	374.00
IUUC-Meu-056685	Macropus eugenii	54.25	6.00e-56	209.00
IUUC-Mor-057075	Magnaporthe oryzae	36.34	3.00e-36	145.00
IUUC-Mpo-057336	Magnaporthe poae	36.90	1.00e-40	159.00
IUUC-Mtr-057654	Medicago truncatula	69.59	4.00e-149	520.00
IUUC-Mla-058866	Melampsora laricipopulina	32.78	8.00e-46	177.00
IUUC-Mga-059566	Meleagris gallopavo	49.03	3.00e-88	317.00
IUUC-Mmr-060831	Microcebus murinus	50.25	3.00e-105	374.00
IUUC-Mdo-062612	Monodelphis domestica	50.25	3.00e-105	374.00
IUUC-Mmu-063399	Mus musculus	50.25	3.00e-105	374.00
IUUC-Mac-065226	Musa acuminata	61.86	2.00e-114	404.00
IUUC-Mpu-065951	Mustela putorius furo	50.25	3.00e-105	374.00
IUUC-Mlu-067858	Myotis lucifugus	50.37	3.00e-104	370.00
IUUC-Nfi-068302	Neosartorya fischeri	36.09	1.00e-37	150.00
IUUC-Ncr-068642	Neurospora crassa	35.67	3.00e-39	155.00
IUUC-Nle-070059	Nomascus leucogenys	50.25	3.00e-105	374.00
IUUC-Opr-070572	Ochotona princeps	50.50	2.00e-105	374.00
IUUC-Ont-071420	Oreochromis niloticus	47.38	2.00e-99	354.00
IUUC-Ocu-074105	Oryctolagus cuniculus	50.25	3.00e-105	374.00
IUUC-Oba-075409	Oryza barthii	89.64	1.00e-180	625.00
IUUC-Obr-076284	Oryza brachyantha	88.22	3.00e-156	543.00
IUUC-Ogl-076984	Oryza glaberrima	88.26	0.00e+00	629.00
IUUC-Ogu-078283	Oryza glumaepatula	88.02	0.00e+00	628.00
IUUC-Olo-081042	Oryza longistaminata	91.67	7.00e-128	449.00
IUUC-Ome-081174	Oryza meridionalis	88.02	0.00e+00	627.00
IUUC-Oni-082033	Oryza nivara	87.78	0.00e+00	629.00
IUUC-Opu-084034	Oryza punctata	88.26	0.00e+00	632.00
IUUC-Oru-084908	Oryza rufipogon	88.73	2.00e-162	565.00
IUUC-Osa-085678	Oryza sativa	88.26	0.00e+00	629.00
IUUC-Ola-086324	Oryzias latipes	50.25	2.00e-105	374.00
IUUC-Olu-087620	Ostreococcus lucimarinus	58.14	1.00e-123	435.00
IUUC-Oga-088446	Otolemur garnettii	50.25	3.00e-105	374.00
IUUC-Oar-090168	Ovis aries	50.25	3.00e-105	374.00
IUUC-Ptr-090691	Pan troglodytes	50.38	2.00e-105	374.00
IUUC-Pan-092772	Papio anubis	50.25	3.00e-105	374.00
IUUC-Psi-093304	Pelodiscus sinensis	49.09	2.00e-80	291.00
IUUC-Pma-094292	Petromyzon marinus	48.60	4.00e-88	317.00
IUUC-Pno-094967	Phaeosphaeria nodorum	35.61	7.00e-36	144.00
IUUC-Ppa-095734	Physcomitrella patens	62.95	5.00e-133	466.00
IUUC-Pfo-097157	Poecilia formosa	50.25	2.00e-105	374.00
IUUC-Pab-097898	Pongo abelii	48.91	3.00e-90	325.00
IUUC-Pop-099943	Populus trichocarpa	70.10	1.00e-151	528.00
IUUC-Pca-100404	Procavia capensis	50.50	2.00e-105	374.00
IUUC-Ppe-102015	Prunus persica	69.07	7.00e-149	518.00
IUUC-Pva-102938	Pteropus vampyrus	46.77	2.00e-53	202.00
IUUC-Pgr-103490	Puccinia graminis	35.31	6.00e-54	203.00
IUUC-Ptt-103946	Puccinia triticina	39.61	9.00e-54	202.00
IUUC-Pte-104094	Pyrenophora teres	37.13	1.00e-37	150.00
IUUC-Pyt-104726	Pyrenophora triticirepentis	36.55	1.00e-37	150.00
IUUC-Rno-104961	Rattus norvegicus	50.25	3.00e-105	374.00
IUUC-Sce-106252	Saccharomyces cerevisiae	34.12	3.00e-40	158.00
IUUC-Sha-107196	Sarcophilus harrisii	42.39	2.00e-85	308.00
IUUC-Ssl-108466	Sclerotinia sclerotiorum	36.81	3.00e-39	155.00
IUUC-Smo-109596	Selaginella moellendorffii	60.26	9.00e-123	432.00
IUUC-Sit-110625	Setaria italica	77.46	4.00e-136	476.00
IUUC-Sly-111410	Solanum lycopersicum	68.56	3.00e-148	516.00
IUUC-Stu-112854	Solanum tuberosum	68.81	6.00e-148	515.00
IUUC-Sar-113705	Sorex araneus	54.25	4.00e-56	210.00
IUUC-Sre-114968	Sporisorium reilianum	36.80	8.00e-48	184.00
IUUC-Ssc-116028	Sus scrofa	50.25	3.00e-105	374.00
IUUC-Tgu-117189	Taeniopygia guttata	50.25	3.00e-105	374.00
IUUC-Tru-117581	Takifugu rubripes	50.25	2.00e-105	374.00
IUUC-Tsy-119425	Tarsius syrichta	38.20	8.00e-57	213.00
IUUC-Tni-120649	Tetraodon nigroviridis	50.00	1.00e-103	368.00
IUUC-Tca-121561	Theobroma cacao	69.07	1.00e-148	518.00
IUUC-Tre-121987	Trichoderma reesei	36.80	5.00e-43	167.00
IUUC-Tvi-122586	Trichoderma virens	36.72	2.00e-42	166.00
IUUC-Tae-123331	Triticum aestivum	85.17	3.00e-171	593.00
IUUC-Tur-126531	Triticum urartu	84.75	4.00e-170	590.00
IUUC-Tme-126973	Tuber melanosporum	37.83	9.00e-36	144.00
IUUC-Tbe-127919	Tupaia belangeri	50.50	2.00e-105	374.00
IUUC-Ttr-129135	Tursiops truncatus	57.44	6.00e-57	213.00
IUUC-Vda-130025	Verticillium dahliae	36.90	7.00e-41	160.00
IUUC-Vpa-130486	Vicugna pacos	29.86	5.00e-35	140.00
IUUC-Vvi-131265	Vitis vinifera	69.07	3.00e-149	520.00
IUUC-Xtr-132175	Xenopus tropicalis	50.25	2.00e-105	374.00
IUUC-Xma-134129	Xiphophorus maculatus	50.25	2.00e-105	374.00
IUUC-Zma-135092	Zea mays	96.64	0.00e+00	664.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence