iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tvi-122380

Ensembl Protein ID

EHK25010

UniProt Accession

G9MLC0; G9MLC0_HYPVG

Genbank Protein ID

EHK25010.1

Protein Name

COPII component protein

Genbank Nucleotide ID

ABDF02000004

Gene Name

TRIVIDRAFT_72210

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIVIDRAFT_72210	EHK25010	EHK25010

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-29	99.0	212	244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.....sdtllvsGsdDgtikvW 28
           gH+d+v+++a+     +  +++s+s D+t+++W
   Q: 212  GHSDWVRDVAWsptvlQKSYIASASQDKTVRIW 244
           8***********87753368************* PP

Organism

Trichoderma virens

Protein Sequence
(Fasta)

MAAQVISNSG HDDMIHDAVL DYYGRKLATC SSDRTIKIFE IEGETQRLVE TLKGHEGAVW 60
CVAWAHPKYG NILASAGYDG KVFIWKEQGA QNSQWQRIYD FPLHKASVNI VSWSPHEAGC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGTATCGGA TCGTAGCTTG CTGGCAGGAA AGCAGCACAG GCCAGATTCG CCAGATCGCA 60
TTTGTCTCGT TTCTTGCTCC CGCAACCCCA ATTCTCCCTC TATATTTCAG CATATTCGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030127--C:COPII vesicle coat
GO:0000139--C:Golgi membrane
GO:0031080--C:nuclear pore outer ring
GO:0035859--C:Seh1-associated complex
GO:0005198--F:structural molecule activity
GO:0090114--P:COPII-coated vesicle budding
GO:0031081--P:nuclear pore distribution
GO:0043547--P:positive regulation of GTPase activity
GO:1904263--P:positive regulation of TORC1 signaling
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0030433--P:ubiquitin-dependent ERAD pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000671	Aegilops tauschii	49.50	4.00e-80	289.00
IUUC-Aml-001832	Ailuropoda melanoleuca	49.83	3.00e-82	296.00
IUUC-Atr-002914	Amborella trichopoda	52.16	3.00e-79	286.00
IUUC-Apl-003992	Anas platyrhynchos	50.34	8.00e-80	288.00
IUUC-Aca-005283	Anolis carolinensis	49.17	1.00e-81	295.00
IUUC-Aly-005654	Arabidopsis lyrata	50.48	2.00e-74	270.00
IUUC-Ath-006816	Arabidopsis thaliana	52.09	2.00e-75	273.00
IUUC-Ago-007827	Ashbya gossypii	51.96	3.00e-89	319.00
IUUC-Acl-008205	Aspergillus clavatus	71.14	6.00e-125	438.00
IUUC-Afl-008748	Aspergillus flavus	71.94	9.00e-132	461.00
IUUC-Afu-008791	Aspergillus fumigatus	70.90	2.00e-124	436.00
IUUC-Ani-009152	Aspergillus nidulans	70.97	5.00e-130	455.00
IUUC-Ang-009765	Aspergillus niger	72.44	8.00e-133	464.00
IUUC-Aor-009927	Aspergillus oryzae	70.71	7.00e-124	434.00
IUUC-Ate-010248	Aspergillus terreus	71.29	4.00e-131	459.00
IUUC-Ame-011478	Astyanax mexicanus	50.33	5.00e-83	299.00
IUUC-Bgr-012276	Blumeria graminis	71.97	6.00e-133	464.00
IUUC-Bta-012700	Bos taurus	50.00	2.00e-81	294.00
IUUC-Bci-013722	Botrytis cinerea	76.97	5.00e-137	478.00
IUUC-Bdi-014818	Brachypodium distachyon	49.50	1.00e-79	288.00
IUUC-Bol-015779	Brassica oleracea	51.45	7.00e-75	272.00
IUUC-Bra-016973	Brassica rapa	51.46	2.00e-75	275.00
IUUC-Cel-018479	Caenorhabditis elegans	39.73	6.00e-57	212.00
IUUC-Cja-019956	Callithrix jacchus	50.53	2.00e-75	274.00
IUUC-Cfa-020752	Canis familiaris	50.00	6.00e-82	295.00
IUUC-Cpo-021871	Cavia porcellus	50.00	2.00e-82	297.00
IUUC-Cre-022797	Chlamydomonas reinhardtii	51.34	1.00e-79	287.00
IUUC-Csa-023393	Chlorocebus sabaeus	50.00	9.00e-82	295.00
IUUC-Cho-024786	Choloepus hoffmanni	42.64	1.00e-26	112.00
IUUC-Cin-025332	Ciona intestinalis	52.16	1.00e-84	304.00
IUUC-Csv-025926	Ciona savignyi	53.02	5.00e-84	302.00
IUUC-Cgl-026413	Colletotrichum gloeosporioides	83.90	3.00e-138	482.00
IUUC-Cne-027054	Cryptococcus neoformans	52.23	1.00e-80	291.00
IUUC-Cme-027165	Cyanidioschyzon merolae	37.18	1.00e-52	199.00
IUUC-Dre-027782	Danio rerio	49.83	7.00e-83	298.00
IUUC-Dno-029628	Dasypus novemcinctus	49.34	7.00e-81	292.00
IUUC-Dor-030650	Dipodomys ordii	48.72	7.00e-60	222.00
IUUC-Dse-031206	Dothistroma septosporum	68.51	1.00e-120	424.00
IUUC-Dme-031854	Drosophila melanogaster	46.96	6.00e-70	256.00
IUUC-Ete-032618	Echinops telfairi	40.10	1.00e-34	138.00
IUUC-Eca-033268	Equus caballus	49.67	1.00e-81	295.00
IUUC-Fca-035918	Felis catus	49.67	6.00e-81	292.00
IUUC-Fal-037551	Ficedula albicollis	50.51	4.00e-77	279.00
IUUC-Fox-037763	Fusarium oxysporum	88.20	3.00e-162	561.00
IUUC-Fso-038341	Fusarium solani	89.94	6.00e-164	568.00
IUUC-Gmo-038638	Gadus morhua	49.36	5.00e-83	299.00
IUUC-Ggr-039865	Gaeumannomyces graminis	76.22	3.00e-137	479.00
IUUC-Gga-040193	Gallus gallus	50.33	4.00e-83	299.00
IUUC-Gac-041337	Gasterosteus aculeatus	30.10	3.00e-30	124.00
IUUC-Gma-044311	Glycine max	50.99	2.00e-76	277.00
IUUC-Ggo-045252	Gorilla gorilla	49.67	4.00e-81	293.00
IUUC-Hsa-046565	Homo sapiens	49.67	5.00e-81	292.00
IUUC-Hvu-047835	Hordeum vulgare	51.16	1.00e-81	294.00
IUUC-Itr-048587	Ictidomys tridecemlineatus	50.00	5.00e-82	296.00
IUUC-Kpa-049148	Komagataella pastoris	57.52	1.00e-97	347.00
IUUC-Lch-050421	Latimeria chalumnae	51.82	1.00e-83	301.00
IUUC-Lpe-051187	Leersia perrieri	49.67	1.00e-79	290.00
IUUC-Loc-052167	Lepisosteus oculatus	50.17	4.00e-84	302.00
IUUC-Lma-053250	Leptosphaeria maculans	71.62	3.00e-121	426.00
IUUC-Laf-054304	Loxodonta africana	50.00	1.00e-82	297.00
IUUC-Mcc-055519	Macaca mulatta	50.00	1.00e-81	295.00
IUUC-Meu-056439	Macropus eugenii	50.00	6.00e-83	298.00
IUUC-Mor-057241	Magnaporthe oryzae	76.53	5.00e-131	458.00
IUUC-Mpo-057373	Magnaporthe poae	66.01	3.00e-111	392.00
IUUC-Mtr-058412	Medicago truncatula	49.51	5.00e-75	272.00
IUUC-Mla-058966	Melampsora laricipopulina	49.08	1.00e-85	307.00
IUUC-Mga-060066	Meleagris gallopavo	50.34	8.00e-80	288.00
IUUC-Mvi-060290	Microbotryum violaceum	50.60	1.00e-84	307.00
IUUC-Mmr-060717	Microcebus murinus	49.52	3.00e-82	296.00
IUUC-Mdo-062496	Monodelphis domestica	49.67	9.00e-83	298.00
IUUC-Mmu-063490	Mus musculus	50.00	5.00e-82	296.00
IUUC-Mac-065307	Musa acuminata	50.83	7.00e-76	275.00
IUUC-Mpu-066601	Mustela putorius furo	50.00	6.00e-82	295.00
IUUC-Mlu-067501	Myotis lucifugus	49.50	4.00e-81	293.00
IUUC-Nfi-068360	Neosartorya fischeri	68.08	5.00e-103	365.00
IUUC-Ncr-068928	Neurospora crassa	83.17	1.00e-149	520.00
IUUC-Nle-069028	Nomascus leucogenys	49.34	6.00e-81	292.00
IUUC-Opr-070446	Ochotona princeps	50.34	6.00e-79	285.00
IUUC-Ont-071587	Oreochromis niloticus	50.50	3.00e-84	303.00
IUUC-Oan-073211	Ornithorhynchus anatinus	49.17	4.00e-82	296.00
IUUC-Ocu-074306	Oryctolagus cuniculus	50.00	4.00e-82	296.00
IUUC-Oba-075069	Oryza barthii	49.50	2.00e-79	287.00
IUUC-Obr-076667	Oryza brachyantha	50.17	2.00e-81	293.00
IUUC-Ogl-077208	Oryza glaberrima	49.50	2.00e-79	287.00
IUUC-Ogu-078513	Oryza glumaepatula	49.50	2.00e-79	287.00
IUUC-Oin-079094	Oryza indica	49.50	2.00e-79	287.00
IUUC-Olo-080473	Oryza longistaminata	49.50	2.00e-79	287.00
IUUC-Ome-081643	Oryza meridionalis	49.50	2.00e-79	287.00
IUUC-Oni-082589	Oryza nivara	49.50	2.00e-79	287.00
IUUC-Opu-083677	Oryza punctata	49.50	2.00e-79	287.00
IUUC-Oru-084537	Oryza rufipogon	49.50	2.00e-79	287.00
IUUC-Osa-085449	Oryza sativa	49.50	2.00e-79	287.00
IUUC-Ola-087226	Oryzias latipes	49.50	2.00e-83	300.00
IUUC-Olu-087893	Ostreococcus lucimarinus	45.61	3.00e-64	236.00
IUUC-Oga-088837	Otolemur garnettii	50.33	3.00e-82	296.00
IUUC-Oar-089594	Ovis aries	50.33	1.00e-81	295.00
IUUC-Ptr-091132	Pan troglodytes	49.50	3.00e-81	293.00
IUUC-Pan-092013	Papio anubis	30.28	3.00e-23	100.00
IUUC-Psi-093568	Pelodiscus sinensis	50.34	6.00e-81	291.00
IUUC-Pma-094756	Petromyzon marinus	58.49	1.00e-32	129.00
IUUC-Pno-094955	Phaeosphaeria nodorum	71.09	5.00e-117	412.00
IUUC-Ppa-095835	Physcomitrella patens	50.82	5.00e-77	279.00
IUUC-Pfo-096063	Poecilia formosa	50.17	2.00e-83	300.00
IUUC-Pab-098674	Pongo abelii	49.34	5.00e-80	289.00
IUUC-Pop-099402	Populus trichocarpa	49.19	4.00e-75	273.00
IUUC-Pca-100824	Procavia capensis	39.14	4.00e-57	213.00
IUUC-Ppe-101278	Prunus persica	49.84	2.00e-74	270.00
IUUC-Pva-103161	Pteropus vampyrus	46.69	2.00e-75	274.00
IUUC-Pgr-103573	Puccinia graminis	49.84	6.00e-88	315.00
IUUC-Ptt-103700	Puccinia triticina	49.06	4.00e-83	299.00
IUUC-Pte-104267	Pyrenophora teres	66.33	3.00e-110	389.00
IUUC-Pyt-104535	Pyrenophora triticirepentis	66.33	5.00e-105	372.00
IUUC-Rno-104833	Rattus norvegicus	50.00	5.00e-82	295.00
IUUC-Sce-106437	Saccharomyces cerevisiae	58.72	1.00e-90	324.00
IUUC-Sha-106611	Sarcophilus harrisii	50.00	6.00e-83	298.00
IUUC-Sja-107654	Schizosaccharomyces japonicus	55.48	2.00e-91	326.00
IUUC-Spo-108362	Schizosaccharomyces pombe	55.15	8.00e-89	318.00
IUUC-Smo-108797	Selaginella moellendorffii	52.96	2.00e-79	287.00
IUUC-Sit-110132	Setaria italica	49.50	2.00e-79	287.00
IUUC-Sly-111254	Solanum lycopersicum	50.49	2.00e-75	273.00
IUUC-Stu-112591	Solanum tuberosum	50.99	2.00e-75	273.00
IUUC-Sar-113279	Sorex araneus	29.45	7.00e-21	93.20
IUUC-Sbi-114229	Sorghum bicolor	49.83	1.00e-79	287.00
IUUC-Sre-114898	Sporisorium reilianum	47.55	5.00e-82	296.00
IUUC-Ssc-115995	Sus scrofa	55.81	3.00e-41	159.00
IUUC-Tgu-116793	Taeniopygia guttata	50.17	5.00e-79	285.00
IUUC-Tru-117797	Takifugu rubripes	49.17	7.00e-83	298.00
IUUC-Tsy-118913	Tarsius syrichta	29.30	2.00e-18	85.10
IUUC-Tni-120366	Tetraodon nigroviridis	49.83	2.00e-83	300.00
IUUC-Tca-121242	Theobroma cacao	48.87	2.00e-74	270.00
IUUC-Tre-121899	Trichoderma reesei	97.71	4.00e-177	611.00
IUUC-Tae-123998	Triticum aestivum	50.83	9.00e-82	295.00
IUUC-Tur-126202	Triticum urartu	50.50	2.00e-81	293.00
IUUC-Tme-127181	Tuber melanosporum	58.25	5.00e-100	356.00
IUUC-Ttr-128448	Tursiops truncatus	48.63	3.00e-63	233.00
IUUC-Uma-129661	Ustilago maydis	49.56	2.00e-84	304.00
IUUC-Vda-129666	Verticillium dahliae	83.22	1.00e-139	487.00
IUUC-Vpa-130318	Vicugna pacos	50.00	9.00e-82	295.00
IUUC-Vvi-130868	Vitis vinifera	49.84	4.00e-76	276.00
IUUC-Xtr-131859	Xenopus tropicalis	49.67	4.00e-82	296.00
IUUC-Xma-133898	Xiphophorus maculatus	50.17	9.00e-84	301.00
IUUC-Yli-134559	Yarrowia lipolytica	61.20	1.00e-98	350.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence