iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028242

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin protein ligase E3 component n-recognin 1

Genbank Nucleotide ID

BX908806

Gene Name

ubr1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000060480.6	ENSDART00000149488.1	ENSDARP00000124166.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/N-recognin/N-domain	9.00e-31	106.8	213	289
E3 activity/N-recognin/UBR-box	5.30e-28	98.3	85	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/N-recognin/N-domain

   S: 1    YylvLfNDEkHsyeqviyslqkAleleqkeakkfatiidkeGRravkaGdyavceeakkeilknseklaqipLkVev 77
           Y+++L+NDE+Hsy++viy+lq+A+ ++q++a+ ++  idkeGRravk G+  +c++ak++i +nse++ q pL+Vev
   Q: 213  YFCILYNDEHHSYDHVIYTLQRAIACDQNQAQVYTALIDKEGRRAVKRGTLRTCQQAKDNIRRNSEHIIQKPLRVEV 289
           9**************************************************************************97 PP

E3 activity/N-recognin/UBR-box

   S: 1    slCgrvfkvgetiyeCrtCsvdetlvlCteCfakvvHkdHeyklkksggggfCdCGdteAwedgskCkkl 70
           ++Cgrvfk get+y+Cr+C++d+t+vlC eCf+k+vHk H+yk++ s+gggfCdCGd eAw++g+ C ++
   Q: 85   QQCGRVFKEGETVYSCRDCAIDPTCVLCIECFQKSVHKSHRYKMHASSGGGFCDCGDVEAWKTGPCCSQH 154
           58***************************************************************99987 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MAESLSAAQL STKWQEASNR GSAILRYLGE QVPLIYCLEV ELQHAEEELK VEQRLLYPLE 60
YFLFGEEPCV GLEKLQRYNS SSSAQQCGRV FKEGETVYSC RDCAIDPTCV LCIECFQKSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGCTGTGG TGACGCTTTA CGGCATTTGG ATCATGGCGG AGTCGCTGAG CGCTGCACAG 60
TTGAGCACGG TAAATATGTG GATTTTACTC ACTTCTGACA CAAATGCAAT CACTTGTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR003769--ClpS_core
IPR014719--Ribosomal_L7/12_C/ClpS-like
IPR003126--Znf_UBR

PROSITE

PS51157--ZF_UBR

Pfam

PF02617--ClpS
PF02207--zf-UBR

SMART

SM00396--ZnF_UBR1

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0030163--P:protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Csv-026033	Ciona savignyi	39.73	3.00e-10	57.80
IUUC-Kpa-049120	Komagataella pastoris	26.89	1.00e-17	87.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence