iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115238

Ensembl Protein ID

ENSSSCP00000016262.2

UniProt Accession

F1SF88; F1SF88_PIG

Genbank Protein ID

ENSSSCP00000016262

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU914326

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000015335.2	ENSSSCT00000016708.2	ENSSSCP00000016262.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-13	51.1	247	281

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf....sdtllvsGsdDgtikvWDlrtgv 34
           ++sv +++f    + +l+v G++ g+i +WD r+++
   Q: 247  QSSVMSVCFarfhP-NLVVGGTYSGQIVLWDNRSHR 281
           57899999999754.9999999*********98875 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MSPSSKSVST PSEAGSQDSG DLGPLTRTLQ WDTDPSVLQL QSDSELGRRL HKLGVSKVTQ 60
VDFLPREVVS YSKETQTPLA THQSEEDEED EEMVEPKVGQ DSELENQDKK QEVKEEKAPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGCTCTTCC GTTAGCAGCC AATTAGGTGA GTCCTACCCG TGGCATAGGG ATAGATGGAG 60
AGACTCCCCA GGTCCCTTGC TCTCATCCGC TTCTGGACCA GCGCCACTCG CTCCCAGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR025956--DYNC1I1/DYNC1I2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF11540--Dynein_IC2
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005868--C:cytoplasmic dynein complex
GO:0043657--C:host cell
GO:0005634--C:nucleus
GO:0019060--P:intracellular transport of viral protein in host cell
GO:0007018--P:microtubule-based movement

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001500	Ailuropoda melanoleuca	98.52	0.00e+00	1095.00
IUUC-Apl-003915	Anas platyrhynchos	94.51	0.00e+00	873.00
IUUC-Aca-004659	Anolis carolinensis	93.78	0.00e+00	1057.00
IUUC-Ame-010879	Astyanax mexicanus	82.70	0.00e+00	944.00
IUUC-Bta-013557	Bos taurus	94.07	0.00e+00	1036.00
IUUC-Cja-018913	Callithrix jacchus	99.07	0.00e+00	1098.00
IUUC-Cfa-020794	Canis familiaris	98.70	0.00e+00	1098.00
IUUC-Csa-023506	Chlorocebus sabaeus	98.89	0.00e+00	1099.00
IUUC-Cho-025102	Choloepus hoffmanni	83.52	0.00e+00	885.00
IUUC-Dre-028093	Danio rerio	76.85	0.00e+00	876.00
IUUC-Dno-029846	Dasypus novemcinctus	98.26	0.00e+00	950.00
IUUC-Dor-030613	Dipodomys ordii	97.96	0.00e+00	1083.00
IUUC-Ete-032322	Echinops telfairi	81.67	0.00e+00	877.00
IUUC-Eca-033324	Equus caballus	98.89	0.00e+00	1096.00
IUUC-Fca-036050	Felis catus	95.00	0.00e+00	1043.00
IUUC-Fal-037664	Ficedula albicollis	95.93	0.00e+00	1077.00
IUUC-Gmo-038624	Gadus morhua	77.82	0.00e+00	804.00
IUUC-Gga-040886	Gallus gallus	95.74	0.00e+00	1073.00
IUUC-Ggo-045363	Gorilla gorilla	98.89	0.00e+00	1097.00
IUUC-Hsa-046861	Homo sapiens	98.89	0.00e+00	1097.00
IUUC-Itr-048603	Ictidomys tridecemlineatus	98.91	0.00e+00	959.00
IUUC-Kpa-049295	Komagataella pastoris	24.78	1.00e-29	124.00
IUUC-Loc-052873	Lepisosteus oculatus	88.56	0.00e+00	996.00
IUUC-Laf-053494	Loxodonta africana	97.96	0.00e+00	1090.00
IUUC-Mcc-055731	Macaca mulatta	98.89	0.00e+00	1097.00
IUUC-Meu-056235	Macropus eugenii	82.48	0.00e+00	875.00
IUUC-Mmr-060828	Microcebus murinus	98.52	0.00e+00	1093.00
IUUC-Mmu-063862	Mus musculus	97.59	0.00e+00	1084.00
IUUC-Mpu-066835	Mustela putorius furo	98.33	0.00e+00	1095.00
IUUC-Mlu-067993	Myotis lucifugus	98.15	0.00e+00	1099.00
IUUC-Nle-069711	Nomascus leucogenys	99.07	0.00e+00	1099.00
IUUC-Opr-070509	Ochotona princeps	96.85	0.00e+00	1068.00
IUUC-Ont-072346	Oreochromis niloticus	81.63	0.00e+00	875.00
IUUC-Ocu-074398	Oryctolagus cuniculus	97.96	0.00e+00	1088.00
IUUC-Ola-087168	Oryzias latipes	75.87	0.00e+00	835.00
IUUC-Oga-088138	Otolemur garnettii	97.61	0.00e+00	931.00
IUUC-Oar-090454	Ovis aries	97.41	0.00e+00	1087.00
IUUC-Ptr-090850	Pan troglodytes	98.89	0.00e+00	1097.00
IUUC-Pan-092449	Papio anubis	98.89	0.00e+00	1099.00
IUUC-Psi-093490	Pelodiscus sinensis	95.56	0.00e+00	1074.00
IUUC-Pma-094729	Petromyzon marinus	74.26	0.00e+00	845.00
IUUC-Pab-098252	Pongo abelii	98.89	0.00e+00	1098.00
IUUC-Pca-100827	Procavia capensis	97.70	0.00e+00	637.00
IUUC-Pva-102223	Pteropus vampyrus	98.51	0.00e+00	1085.00
IUUC-Rno-105683	Rattus norvegicus	97.59	0.00e+00	1076.00
IUUC-Tgu-117310	Taeniopygia guttata	89.52	0.00e+00	966.00
IUUC-Ttr-129188	Tursiops truncatus	98.89	0.00e+00	1098.00
IUUC-Xtr-132370	Xenopus tropicalis	88.05	0.00e+00	839.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence