iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-097865

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Histone-binding protein RBBP7

Genbank Nucleotide ID

ABGA01202898

Gene Name

RBBP7

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000020158.2	ENSPPYT00000023506.1	ENSPPYP00000022548.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.20e-38	126.7	271	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           Ht++v+cl+f   s+ +l++Gs D+t+ +WDlr  
   Q: 271  HTAEVNCLSFnpySEFILATGSADKTVALWDLRNL 305
           **********96554568*************9875 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MASKEMFEDT VEERVINEEY KIWKKNTPFL YDLVMTHALQ WPSLTVQWLP EVTKPEGKDY 60
ALHWLVLGTH TSDEQNHLVV ARVHIPNDDA QFDASHCDSD KGEFGGFGSV TGKIECEIKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAGTA AAGAGAGTAA GAGGCCCTGC AGGGCGGCGC GCGCCGGGTC CGGGGGCGGC 60
GGCGCCAGGC CNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0035098--C:ESC/E(Z) complex
GO:0016581--C:NuRD complex
GO:0003723--F:RNA binding
GO:0070370--P:cellular heat acclimation
GO:0030308--P:negative regulation of cell growth
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001256	Ailuropoda melanoleuca	99.05	0.00e+00	867.00
IUUC-Apl-003357	Anas platyrhynchos	92.07	0.00e+00	809.00
IUUC-Bta-013455	Bos taurus	99.53	0.00e+00	877.00
IUUC-Cja-019957	Callithrix jacchus	99.29	0.00e+00	868.00
IUUC-Cfa-020917	Canis familiaris	99.05	0.00e+00	869.00
IUUC-Cpo-022173	Cavia porcellus	100.00	0.00e+00	881.00
IUUC-Csa-023738	Chlorocebus sabaeus	100.00	0.00e+00	881.00
IUUC-Dno-029206	Dasypus novemcinctus	99.76	0.00e+00	879.00
IUUC-Dor-030733	Dipodomys ordii	86.02	0.00e+00	737.00
IUUC-Eca-034138	Equus caballus	99.05	0.00e+00	868.00
IUUC-Fca-035977	Felis catus	99.05	0.00e+00	868.00
IUUC-Fal-037538	Ficedula albicollis	90.05	0.00e+00	797.00
IUUC-Gga-040764	Gallus gallus	93.65	0.00e+00	828.00
IUUC-Hsa-045677	Homo sapiens	100.00	0.00e+00	881.00
IUUC-Itr-048060	Ictidomys tridecemlineatus	100.00	0.00e+00	868.00
IUUC-Kpa-049258	Komagataella pastoris	36.65	7.00e-71	260.00
IUUC-Laf-053973	Loxodonta africana	98.83	0.00e+00	869.00
IUUC-Mcc-055687	Macaca mulatta	100.00	0.00e+00	881.00
IUUC-Mga-059209	Meleagris gallopavo	90.82	0.00e+00	795.00
IUUC-Mmr-061008	Microcebus murinus	99.29	0.00e+00	870.00
IUUC-Mdo-062817	Monodelphis domestica	96.24	0.00e+00	850.00
IUUC-Mmu-063773	Mus musculus	99.76	0.00e+00	879.00
IUUC-Mpu-066722	Mustela putorius furo	99.05	0.00e+00	867.00
IUUC-Mlu-067813	Myotis lucifugus	99.05	0.00e+00	868.00
IUUC-Nle-070023	Nomascus leucogenys	99.29	0.00e+00	869.00
IUUC-Oan-073579	Ornithorhynchus anatinus	95.29	0.00e+00	842.00
IUUC-Ocu-074778	Oryctolagus cuniculus	99.76	0.00e+00	879.00
IUUC-Oga-088987	Otolemur garnettii	92.20	0.00e+00	785.00
IUUC-Oar-090250	Ovis aries	98.82	0.00e+00	862.00
IUUC-Ptr-091598	Pan troglodytes	99.76	0.00e+00	869.00
IUUC-Pan-092412	Papio anubis	100.00	0.00e+00	881.00
IUUC-Psi-093162	Pelodiscus sinensis	95.13	0.00e+00	773.00
IUUC-Pva-102369	Pteropus vampyrus	99.05	0.00e+00	869.00
IUUC-Rno-105892	Rattus norvegicus	100.00	0.00e+00	881.00
IUUC-Sha-107575	Sarcophilus harrisii	95.29	0.00e+00	840.00
IUUC-Sar-113236	Sorex araneus	90.84	0.00e+00	768.00
IUUC-Ssc-116352	Sus scrofa	99.05	0.00e+00	870.00
IUUC-Tsy-118854	Tarsius syrichta	99.29	0.00e+00	869.00
IUUC-Tbe-128010	Tupaia belangeri	88.15	0.00e+00	762.00
IUUC-Ttr-128558	Tursiops truncatus	87.38	0.00e+00	743.00
IUUC-Vpa-130664	Vicugna pacos	99.29	0.00e+00	865.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence