iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005696

Ensembl Protein ID

fgenesh2_kg.8__323__AT5G44750.2

UniProt Accession

D7MLH4; D7MLH4_ARALL

Genbank Protein ID

EFH41586.1

Protein Name

Polymerase ATREV1-1105

Genbank Nucleotide ID

GL348720

Gene Name

REV1; ARALYDRAFT_494507

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__323__AT5G44750.2	fgenesh2_kg.8__323__AT5G44750.2	fgenesh2_kg.8__323__AT5G44750.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBM	29.98	2.00e-48	189.00	IUUC-Sce-106236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MKRSLGSNSS NNSGSGSNKK TKKKNNPSNQ KTLGAAWGAA SSRSSFRSSP FSDFGSYMEV 60
KNRKLQNQFE TEASASSRGI SGSEKLIFQG VSIFVDGFTI PSHQELRAYM IKYGGRFENY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAATTCCG TTGAAAGCTT CTTCTTCTTC TTCTCCGTCT CGCTCTGAGA TTCATCCCCA 60
ACAACTACAA TGAAGCGTAG CTTGGGTTCC AATTCTTCGA ACAATAGTGG CAGTGGAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001357--BRCT_dom
IPR017961--DNA_pol_Y-fam_little_finger
IPR001126--UmuC

PROSITE

PS50172--BRCT
PS50173--UMUC

Pfam

PF16589--BRCT_2
PF00817--IMS
PF11799--IMS_C

SMART

SM00292--BRCT

Gene Ontology

GO:0003684--F:damaged DNA binding
GO:0003887--F:DNA-directed DNA polymerase activity
GO:0006281--P:DNA repair
GO:0010224--P:response to UV-B

KEGG

aly:ARALYDRAFT_494507

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000375	Aegilops tauschii	36.48	8.00e-87	314.00
IUUC-Aml-001185	Ailuropoda melanoleuca	31.11	2.00e-86	313.00
IUUC-Atr-002915	Amborella trichopoda	45.11	0.00e+00	819.00
IUUC-Apl-004054	Anas platyrhynchos	30.09	3.00e-85	309.00
IUUC-Aca-004304	Anolis carolinensis	29.47	4.00e-84	306.00
IUUC-Ath-006893	Arabidopsis thaliana	93.61	0.00e+00	1942.00
IUUC-Ago-007722	Ashbya gossypii	32.68	9.00e-53	201.00
IUUC-Acl-008347	Aspergillus clavatus	31.05	4.00e-95	342.00
IUUC-Afl-008444	Aspergillus flavus	34.91	1.00e-76	280.00
IUUC-Afu-008837	Aspergillus fumigatus	30.44	1.00e-91	330.00
IUUC-Ani-009188	Aspergillus nidulans	33.74	5.00e-74	272.00
IUUC-Ang-009866	Aspergillus niger	28.44	6.00e-95	342.00
IUUC-Aor-010107	Aspergillus oryzae	34.91	1.00e-76	280.00
IUUC-Ate-010359	Aspergillus terreus	29.50	4.00e-78	286.00
IUUC-Ame-010664	Astyanax mexicanus	43.90	2.00e-75	277.00
IUUC-Bgr-012244	Blumeria graminis	34.62	9.00e-71	261.00
IUUC-Bta-013405	Bos taurus	33.06	9.00e-81	295.00
IUUC-Bci-013849	Botrytis cinerea	36.43	2.00e-77	283.00
IUUC-Bdi-014066	Brachypodium distachyon	44.25	0.00e+00	808.00
IUUC-Bol-015544	Brassica oleracea	80.15	0.00e+00	1668.00
IUUC-Bra-017792	Brassica rapa	78.41	0.00e+00	1633.00
IUUC-Cel-018148	Caenorhabditis elegans	34.70	7.00e-66	245.00
IUUC-Cja-019742	Callithrix jacchus	31.03	2.00e-50	193.00
IUUC-Cfa-020112	Canis familiaris	33.06	1.00e-85	311.00
IUUC-Cpo-022152	Cavia porcellus	29.61	3.00e-84	306.00
IUUC-Cre-022951	Chlamydomonas reinhardtii	37.91	2.00e-60	226.00
IUUC-Csa-023504	Chlorocebus sabaeus	31.65	6.00e-84	305.00
IUUC-Cho-024780	Choloepus hoffmanni	43.93	6.00e-22	99.40
IUUC-Cin-025276	Ciona intestinalis	39.95	2.00e-89	322.00
IUUC-Csv-026283	Ciona savignyi	34.52	8.00e-72	264.00
IUUC-Cgl-026726	Colletotrichum gloeosporioides	35.40	2.00e-77	283.00
IUUC-Cne-027079	Cryptococcus neoformans	34.79	1.00e-62	234.00
IUUC-Cme-027346	Cyanidioschyzon merolae	32.53	2.00e-49	190.00
IUUC-Dre-028073	Danio rerio	45.51	1.00e-74	275.00
IUUC-Dno-030038	Dasypus novemcinctus	29.99	6.00e-116	411.00
IUUC-Dor-031100	Dipodomys ordii	28.71	3.00e-81	296.00
IUUC-Dse-031310	Dothistroma septosporum	35.48	1.00e-75	278.00
IUUC-Dme-031991	Drosophila melanogaster	31.11	2.00e-70	259.00
IUUC-Ete-033082	Echinops telfairi	39.61	6.00e-41	162.00
IUUC-Eca-033471	Equus caballus	30.76	2.00e-84	306.00
IUUC-Eeu-034993	Erinaceus europaeus	41.80	2.00e-71	263.00
IUUC-Fca-035367	Felis catus	31.09	6.00e-88	318.00
IUUC-Fal-036973	Ficedula albicollis	32.70	6.00e-74	272.00
IUUC-Fox-037677	Fusarium oxysporum	29.66	5.00e-75	275.00
IUUC-Fso-038252	Fusarium solani	31.60	1.00e-89	324.00
IUUC-Gmo-039669	Gadus morhua	38.59	1.00e-84	307.00
IUUC-Ggr-039988	Gaeumannomyces graminis	34.30	1.00e-72	267.00
IUUC-Gga-040423	Gallus gallus	32.80	8.00e-83	301.00
IUUC-Gac-042134	Gasterosteus aculeatus	35.89	1.00e-85	310.00
IUUC-Gma-042929	Glycine max	52.18	0.00e+00	1046.00
IUUC-Ggo-044528	Gorilla gorilla	31.60	3.00e-85	310.00
IUUC-Hsa-046259	Homo sapiens	34.10	6.00e-85	308.00
IUUC-Hvu-047139	Hordeum vulgare	65.33	2.00e-115	408.00
IUUC-Itr-048621	Ictidomys tridecemlineatus	30.70	1.00e-85	311.00
IUUC-Kpa-049169	Komagataella pastoris	30.97	1.00e-64	240.00
IUUC-Lch-050471	Latimeria chalumnae	32.05	8.00e-102	364.00
IUUC-Lpe-050800	Leersia perrieri	45.35	0.00e+00	835.00
IUUC-Loc-052320	Lepisosteus oculatus	29.43	6.00e-46	179.00
IUUC-Lma-053149	Leptosphaeria maculans	30.61	4.00e-81	295.00
IUUC-Laf-053810	Loxodonta africana	30.75	1.00e-81	298.00
IUUC-Mcc-055574	Macaca mulatta	33.72	7.00e-84	305.00
IUUC-Meu-055945	Macropus eugenii	30.87	7.00e-33	135.00
IUUC-Mor-057195	Magnaporthe oryzae	35.16	9.00e-74	271.00
IUUC-Mpo-057488	Magnaporthe poae	35.62	2.00e-72	266.00
IUUC-Mtr-057955	Medicago truncatula	51.87	0.00e+00	1029.00
IUUC-Mla-059027	Melampsora laricipopulina	36.38	5.00e-63	235.00
IUUC-Mga-060156	Meleagris gallopavo	32.75	3.00e-83	303.00
IUUC-Mvi-060398	Microbotryum violaceum	34.87	4.00e-67	249.00
IUUC-Mmr-061113	Microcebus murinus	31.21	4.00e-84	306.00
IUUC-Mdo-063001	Monodelphis domestica	29.91	1.00e-83	304.00
IUUC-Mmu-063180	Mus musculus	30.24	5.00e-81	295.00
IUUC-Mac-065551	Musa acuminata	41.10	2.00e-126	445.00
IUUC-Mpu-066525	Mustela putorius furo	31.20	2.00e-86	313.00
IUUC-Mlu-067877	Myotis lucifugus	31.11	3.00e-84	306.00
IUUC-Nfi-068418	Neosartorya fischeri	29.29	1.00e-93	337.00
IUUC-Ncr-068648	Neurospora crassa	32.48	2.00e-96	347.00
IUUC-Nle-069959	Nomascus leucogenys	32.82	7.00e-85	308.00
IUUC-Opr-070522	Ochotona princeps	35.88	7.00e-63	235.00
IUUC-Ont-072293	Oreochromis niloticus	34.40	4.00e-74	273.00
IUUC-Oan-073519	Ornithorhynchus anatinus	31.55	9.00e-76	278.00
IUUC-Ocu-074492	Oryctolagus cuniculus	32.95	1.00e-81	297.00
IUUC-Oba-075567	Oryza barthii	45.35	0.00e+00	846.00
IUUC-Obr-076332	Oryza brachyantha	44.44	0.00e+00	786.00
IUUC-Ogl-077348	Oryza glaberrima	45.60	0.00e+00	879.00
IUUC-Ogu-078779	Oryza glumaepatula	45.17	0.00e+00	841.00
IUUC-Oin-079738	Oryza indica	42.70	0.00e+00	795.00
IUUC-Olo-080701	Oryza longistaminata	42.72	0.00e+00	794.00
IUUC-Ome-081708	Oryza meridionalis	44.28	0.00e+00	787.00
IUUC-Oni-082251	Oryza nivara	44.89	0.00e+00	827.00
IUUC-Opu-083528	Oryza punctata	43.95	0.00e+00	828.00
IUUC-Oru-084293	Oryza rufipogon	44.50	0.00e+00	823.00
IUUC-Osa-085549	Oryza sativa	45.51	0.00e+00	876.00
IUUC-Ola-086793	Oryzias latipes	37.77	5.00e-75	275.00
IUUC-Olu-087786	Ostreococcus lucimarinus	36.43	2.00e-69	256.00
IUUC-Oga-089006	Otolemur garnettii	30.36	2.00e-80	293.00
IUUC-Oar-089597	Ovis aries	33.12	9.00e-84	305.00
IUUC-Ptr-091520	Pan troglodytes	34.10	2.00e-84	307.00
IUUC-Pan-092333	Papio anubis	33.99	2.00e-83	303.00
IUUC-Psi-094004	Pelodiscus sinensis	32.20	4.00e-81	296.00
IUUC-Pma-094128	Petromyzon marinus	36.91	4.00e-47	182.00
IUUC-Pno-094849	Phaeosphaeria nodorum	30.85	2.00e-77	283.00
IUUC-Ppa-095714	Physcomitrella patens	40.20	0.00e+00	726.00
IUUC-Pfo-096569	Poecilia formosa	43.79	3.00e-71	263.00
IUUC-Pab-097960	Pongo abelii	33.93	6.00e-84	305.00
IUUC-Pop-098921	Populus trichocarpa	50.88	0.00e+00	999.00
IUUC-Pca-100509	Procavia capensis	31.41	7.00e-51	195.00
IUUC-Ppe-101730	Prunus persica	52.64	0.00e+00	1016.00
IUUC-Pva-102142	Pteropus vampyrus	30.31	1.00e-83	304.00
IUUC-Pgr-103446	Puccinia graminis	30.74	3.00e-49	189.00
IUUC-Ptt-103849	Puccinia triticina	28.88	9.00e-51	196.00
IUUC-Pte-104128	Pyrenophora teres	34.44	1.00e-84	308.00
IUUC-Pyt-104754	Pyrenophora triticirepentis	32.38	4.00e-86	312.00
IUUC-Rno-104871	Rattus norvegicus	29.45	1.00e-114	407.00
IUUC-Sce-106236	Saccharomyces cerevisiae	29.98	2.00e-49	190.00
IUUC-Sha-106962	Sarcophilus harrisii	29.59	2.00e-83	303.00
IUUC-Sja-107691	Schizosaccharomyces japonicus	36.89	4.00e-75	275.00
IUUC-Spo-108170	Schizosaccharomyces pombe	37.62	4.00e-63	235.00
IUUC-Ssl-108668	Sclerotinia sclerotiorum	36.20	1.00e-80	295.00
IUUC-Smo-109554	Selaginella moellendorffii	48.44	1.00e-137	483.00
IUUC-Sit-110479	Setaria italica	43.33	6.00e-174	604.00
IUUC-Sly-111752	Solanum lycopersicum	49.95	0.00e+00	992.00
IUUC-Stu-112284	Solanum tuberosum	26.54	6.00e-31	128.00
IUUC-Sar-113304	Sorex araneus	31.35	2.00e-84	307.00
IUUC-Sbi-114196	Sorghum bicolor	42.94	3.00e-169	588.00
IUUC-Sre-115151	Sporisorium reilianum	28.31	3.00e-67	250.00
IUUC-Ssc-116104	Sus scrofa	33.71	5.00e-80	292.00
IUUC-Tgu-117438	Taeniopygia guttata	30.03	6.00e-86	312.00
IUUC-Tru-118553	Takifugu rubripes	45.99	3.00e-72	266.00
IUUC-Tsy-119056	Tarsius syrichta	32.91	1.00e-86	314.00
IUUC-Tni-119933	Tetraodon nigroviridis	38.17	2.00e-85	310.00
IUUC-Tca-121376	Theobroma cacao	51.09	0.00e+00	1041.00
IUUC-Tre-121972	Trichoderma reesei	28.99	2.00e-84	306.00
IUUC-Tvi-122342	Trichoderma virens	32.58	8.00e-88	318.00
IUUC-Tae-123898	Triticum aestivum	45.99	0.00e+00	665.00
IUUC-Tur-126735	Triticum urartu	39.48	1.00e-145	510.00
IUUC-Tme-126999	Tuber melanosporum	36.91	2.00e-75	277.00
IUUC-Tbe-127280	Tupaia belangeri	45.45	1.00e-30	128.00
IUUC-Ttr-129104	Tursiops truncatus	29.24	2.00e-80	293.00
IUUC-Uma-129562	Ustilago maydis	32.22	6.00e-64	239.00
IUUC-Vda-129862	Verticillium dahliae	37.99	6.00e-79	288.00
IUUC-Vpa-130819	Vicugna pacos	34.31	5.00e-43	169.00
IUUC-Vvi-131111	Vitis vinifera	51.88	0.00e+00	1009.00
IUUC-Xtr-132629	Xenopus tropicalis	29.06	2.00e-74	274.00
IUUC-Xma-134065	Xiphophorus maculatus	36.13	6.00e-74	272.00
IUUC-Yli-134633	Yarrowia lipolytica	32.08	6.00e-55	209.00
IUUC-Zma-135176	Zea mays	47.56	0.00e+00	792.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence