iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000016118.1	ENSORLT00000020170.1	ENSORLP00000020169.1
ENSORLG00000016118.1	ENSORLT00000020173.1	ENSORLP00000020172.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-06	28.8	27	89
E3 activity/RING/RING	7.20e-08	33.1	29	70

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPnltlrrliqa 67
           + Cp+  +++++Pvvl++ +++ +++++++ a++g+   cP++r +l+ +d vP+ltlr+l +a
   Q: 27   LTCPVCCDIFKEPVVLKCSHSFCAACLQQYWARQGRrrDCPLCR-TLSVDDPVPSLTLRNLCEA 89
           78***************************998888779*****8.699************9887 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C++C++ fk+ p+vl C H f+a Cl q w      + ++  CPlCr
   Q: 29   CPVCCDIFKE-PVVLKCSHSFCAACLqQYW----ARQGRRRDCPLCR 70
           ********99.999************5555....55666667****8 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

FFPSKLLHLR VSSADMAGRL SLPEVDLTCP VCCDIFKEPV VLKCSHSFCA ACLQQYWARQ 60
GRRRDCPLCR TLSVDDPVPS LTLRNLCEAC VTEDEGQTAG DAEGGLYCDP EVTCPLHGER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTCCCAT CAAAACTCCT ACATTTAAGA GTTTCCAGGT GATTTCTCAT CCCTTTATGG 60
TCTGAACGGA TGCCGGTGTT TGTCCAGCAG ATCCAGCTCC CAAACTTTGA AACTTTCACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box
PF13445--zf-RING_UBOX

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bci-013692	Botrytis cinerea	35.48	1.00e-09	58.50
IUUC-Dse-031398	Dothistroma septosporum	43.33	1.00e-10	61.20
IUUC-Gmo-038818	Gadus morhua	51.10	1.00e-138	486.00
IUUC-Gac-042472	Gasterosteus aculeatus	61.19	3.00e-168	584.00
IUUC-Kpa-049392	Komagataella pastoris	39.73	2.00e-10	59.70
IUUC-Ont-071392	Oreochromis niloticus	63.49	4.00e-178	617.00
IUUC-Pfo-097106	Poecilia formosa	67.07	0.00e+00	681.00
IUUC-Pte-104318	Pyrenophora teres	28.99	1.00e-07	52.40
IUUC-Pyt-104520	Pyrenophora triticirepentis	28.99	1.00e-07	52.00
IUUC-Sre-115193	Sporisorium reilianum	44.12	1.00e-06	48.90
IUUC-Tru-117718	Takifugu rubripes	60.08	2.00e-171	595.00
IUUC-Tme-126916	Tuber melanosporum	35.38	1.00e-07	52.00
IUUC-Uma-129518	Ustilago maydis	44.12	6.00e-07	49.70
IUUC-Xma-134222	Xiphophorus maculatus	67.47	0.00e+00	653.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence