iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114045

UUCD1 version

UUC-SoB-01111

Ensembl Protein ID

Sb07g004210.1

UniProt Accession

A0A1B6PFZ2; A0A1B6PFZ2_SORBI

Genbank Protein ID

KXG24505.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G052000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g004210	Sb07g004210.1	Sb07g004210.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-06	29.0	203	258
E3 activity/RING/RING	3.80e-09	37.7	206	247

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPn 58
            f C+I lel r+Pvv+++G+ +   ++ +wl  + +  +cPv++ ++   d++P 
   Q: 203  SFECTICLELARQPVVTSCGHLFCWPCLYQWLHAQSSsfECPVCKGEVLTGDITPI 258
           79******************************77777789*******999999996 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle  ++ p+v++CgH+f+  Cl++w    + +s +f CP+C+
   Q: 206  CTICLELARQ-PVVTSCGHLFCWPCLYQW---LHAQSSSFECPVCK 247
           ******8877.999***************...44599********7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAGDEAAEGS GRMHMDLNLH VGLPPLPQPR VQLDTSTASS STLMPPNLTG ATPEAPTTGE 60
PEESLAPAAT TFSPSNTTLF ALEEHPMLDP IVYSWLDGNS ASGEEYTDAP EPSAPAPVDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGGCG ACGAGGCTGC GGAGGGCAGC GGGAGGATGC ACATGGATCT AAACCTGCAT 60
GTCGGCCTCC CTCCATTGCC ACAGCCTCGA GTCCAGCTCG ACACTTCCAC AGCTTCTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005506	Arabidopsis lyrata	50.42	1.00e-30	126.00
IUUC-Ath-007551	Arabidopsis thaliana	56.00	1.00e-30	126.00
IUUC-Bol-015771	Brassica oleracea	54.55	4.00e-29	121.00
IUUC-Cho-024697	Choloepus hoffmanni	42.86	1.00e-08	54.30
IUUC-Cin-025364	Ciona intestinalis	31.58	1.00e-09	56.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence