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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Spo-108189
UUCD1 version UUC-ScP-00237
Ensembl Protein ID SPAC227.12.1:pep
UniProt Accession Q9UTC7; YIDC_SCHPO
Genbank Protein ID CAB61461.1
Protein Name Uncharacterized WD repeat-containing protein C227.12
Genbank Nucleotide ID CU329670
Gene Name rna4; SPAC227.12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPAC227.12 SPAC227.12.1 SPAC227.12.1:pep
Annotation
mRNA Expression
GEO
Protein-protein Interaction
Mentha
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.60e-40 133.5 348 380
UBD/Beta-Prp 4.90e-61 204.6 174 399
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
    H + ++a+ ++ l+++s D t+k+WDlr+
   Q: 348 HIRQIVAMAWsPNgYQLATSSADDTVKIWDLRK 380
    67788999***77688**************986 PP
   


   UBD/Beta-Prp

   S: 12   vitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.........ilvtgseDrtikvwdlstgkcvhtlkghed 95
    +i v fs++++++a+gs+ g +kvw+ ++ + ++ + gh++ v+ +++ p + +l+tg+ D+t+++w s+++++ l+gh +
   Q: 174 PIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQawdadseqlTLATGAADNTVCLWKASQSTPLLRLEGHLA 266
    577899*************************************66655544333333334455****************************** PP
   S: 96 svlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsf 188
    +v ++f+psgd+lvs+s d t r+wd++tg +l +++gh++ + +++ +pdg+l+ sG++D + r+Wdl++gk + l + h +++ +++
   Q: 267 RVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELL-MQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDE-HIRQIVAMAW 357
    ***********************************.********************************************99.********** PP
   S: 189 dsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrf 230
    ++ng +l++ s d tvk+wdl++ + +t +h++ v++vr
   Q: 358 SPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRY 399
    **************************************9986 PP
   

Organism Schizosaccharomyces pombe
Protein Sequence
(Fasta)
MNENEGISLG ELETRPFSEG ITRFTKEQAA YYAEQKEKDR IKALKIPYED SKVREYLRRY 60
GEPITYFGED ALARRQRLQQ LMIEKSLEGD NPLDVDQGAS ENIEKETYVQ GSHELLVARK 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Spo-108189|E3,WD_repeat;UBD,Beta-Prp|Schizosaccharomyces pombe
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTTGAACTGA ACATATGCGT TATATCACAG TATACCGAAG TGCGCAAAGC TCGAACAATT 60
TACAAAAAGC TAAATACGAT AGTGCGTAAA AAATAGTAGT TTACATTAGA GGTAAGTGTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Spo-108189|E3,WD_repeat;UBD,Beta-Prp|Schizosaccharomyces pombe
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0046540--C:U4/U6 x U5 tri-snRNP complex
GO:0030621--F:U4 snRNA binding
GO:0017070--F:U6 snRNA binding
GO:0045292--P:mRNA cis splicing, via spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

KEGG spo:SPAC227.12
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000771 Aegilops tauschii 39.81 1.00e-86 311.00
IUUC-Aml-001737 Ailuropoda melanoleuca 38.12 1.00e-85 308.00
IUUC-Atr-002828 Amborella trichopoda 40.27 3.00e-83 300.00
IUUC-Apl-003723 Anas platyrhynchos 37.67 1.00e-86 311.00
IUUC-Aca-004972 Anolis carolinensis 37.47 3.00e-84 303.00
IUUC-Aly-006531 Arabidopsis lyrata 38.41 1.00e-76 278.00
IUUC-Ath-007367 Arabidopsis thaliana 39.45 6.00e-88 316.00
IUUC-Ago-007893 Ashbya gossypii 37.06 2.00e-62 230.00
IUUC-Acl-008236 Aspergillus clavatus 37.45 3.00e-84 303.00
IUUC-Afl-008522 Aspergillus flavus 39.38 3.00e-91 327.00
IUUC-Afu-008904 Aspergillus fumigatus 39.06 3.00e-90 323.00
IUUC-Ani-009198 Aspergillus nidulans 38.45 3.00e-91 327.00
IUUC-Ang-009662 Aspergillus niger 40.31 2.00e-90 324.00
IUUC-Aor-009881 Aspergillus oryzae 39.38 3.00e-91 327.00
IUUC-Ate-010333 Aspergillus terreus 39.92 1.00e-84 305.00
IUUC-Ame-011697 Astyanax mexicanus 37.16 2.00e-85 307.00
IUUC-Bgr-012254 Blumeria graminis 41.56 2.00e-100 357.00
IUUC-Bta-012615 Bos taurus 38.34 7.00e-87 312.00
IUUC-Bci-013720 Botrytis cinerea 41.25 7.00e-93 332.00
IUUC-Bdi-014302 Brachypodium distachyon 40.64 1.00e-90 324.00
IUUC-Bol-015594 Brassica oleracea 39.22 5.00e-78 283.00
IUUC-Bra-017465 Brassica rapa 39.45 2.00e-77 281.00
IUUC-Cel-018632 Caenorhabditis elegans 37.89 3.00e-78 283.00
IUUC-Cja-019747 Callithrix jacchus 38.12 6.00e-86 309.00
IUUC-Cfa-020288 Canis familiaris 38.12 9.00e-86 308.00
IUUC-Cpo-021440 Cavia porcellus 38.41 4.00e-86 310.00
IUUC-Cre-022716 Chlamydomonas reinhardtii 42.50 1.00e-69 254.00
IUUC-Csa-023139 Chlorocebus sabaeus 40.00 1.00e-70 257.00
IUUC-Cho-024481 Choloepus hoffmanni 37.00 3.00e-80 290.00
IUUC-Cin-025106 Ciona intestinalis 38.41 1.00e-89 321.00
IUUC-Csv-026087 Ciona savignyi 39.41 1.00e-88 318.00
IUUC-Cgl-026538 Colletotrichum gloeosporioides 39.64 2.00e-93 335.00
IUUC-Cne-026793 Cryptococcus neoformans 40.52 1.00e-98 351.00
IUUC-Dre-028723 Danio rerio 35.99 8.00e-82 295.00
IUUC-Dno-029299 Dasypus novemcinctus 38.12 6.00e-86 309.00
IUUC-Dse-031562 Dothistroma septosporum 38.93 3.00e-92 330.00
IUUC-Dme-031783 Drosophila melanogaster 35.43 1.00e-71 262.00
IUUC-Ete-032669 Echinops telfairi 37.89 2.00e-86 310.00
IUUC-Eca-033566 Equus caballus 38.12 1.00e-85 308.00
IUUC-Eeu-034524 Erinaceus europaeus 43.35 3.00e-59 220.00
IUUC-Fca-036215 Felis catus 38.12 8.00e-86 308.00
IUUC-Fal-037018 Ficedula albicollis 37.86 4.00e-76 276.00
IUUC-Fox-037936 Fusarium oxysporum 39.96 7.00e-90 322.00
IUUC-Fso-038366 Fusarium solani 40.73 3.00e-95 340.00
IUUC-Gmo-038966 Gadus morhua 40.40 2.00e-60 223.00
IUUC-Ggr-039942 Gaeumannomyces graminis 39.50 5.00e-88 316.00
IUUC-Gga-040797 Gallus gallus 37.67 2.00e-86 311.00
IUUC-Gac-042598 Gasterosteus aculeatus 35.27 2.00e-74 271.00
IUUC-Gma-044220 Glycine max 38.68 9.00e-81 292.00
IUUC-Ggo-044682 Gorilla gorilla 38.12 1.00e-85 308.00
IUUC-Hsa-045804 Homo sapiens 38.12 7.00e-86 309.00
IUUC-Hvu-047567 Hordeum vulgare 38.43 5.00e-82 296.00
IUUC-Itr-047882 Ictidomys tridecemlineatus 37.89 4.00e-85 306.00
IUUC-Kpa-049369 Komagataella pastoris 38.48 1.00e-65 241.00
IUUC-Lch-050074 Latimeria chalumnae 35.94 2.00e-76 277.00
IUUC-Lpe-051333 Leersia perrieri 41.30 9.00e-86 308.00
IUUC-Loc-052164 Lepisosteus oculatus 36.24 4.00e-84 303.00
IUUC-Lma-053088 Leptosphaeria maculans 35.65 1.00e-79 288.00
IUUC-Laf-053460 Loxodonta africana 38.12 7.00e-86 308.00
IUUC-Mcc-055859 Macaca mulatta 38.12 8.00e-86 308.00
IUUC-Meu-056134 Macropus eugenii 38.34 3.00e-86 310.00
IUUC-Mor-057251 Magnaporthe oryzae 41.03 1.00e-94 338.00
IUUC-Mpo-057375 Magnaporthe poae 44.00 2.00e-56 209.00
IUUC-Mtr-057656 Medicago truncatula 37.56 4.00e-72 263.00
IUUC-Mla-059145 Melampsora laricipopulina 42.79 2.00e-92 330.00
IUUC-Mga-059855 Meleagris gallopavo 37.67 2.00e-86 311.00
IUUC-Mvi-060372 Microbotryum violaceum 37.85 4.00e-78 283.00
IUUC-Mmr-060826 Microcebus murinus 38.12 1.00e-85 308.00
IUUC-Mdo-062748 Monodelphis domestica 38.12 2.00e-85 308.00
IUUC-Mmu-063351 Mus musculus 38.34 5.00e-86 309.00
IUUC-Mac-064846 Musa acuminata 38.90 1.00e-76 278.00
IUUC-Mpu-066006 Mustela putorius furo 38.12 8.00e-86 308.00
IUUC-Mlu-067398 Myotis lucifugus 38.12 1.00e-85 308.00
IUUC-Nfi-068399 Neosartorya fischeri 39.26 1.00e-94 338.00
IUUC-Ncr-068711 Neurospora crassa 41.68 3.00e-94 337.00
IUUC-Nle-069982 Nomascus leucogenys 38.12 6.00e-86 309.00
IUUC-Opr-070596 Ochotona princeps 38.12 6.00e-86 309.00
IUUC-Ont-072374 Oreochromis niloticus 36.88 2.00e-76 278.00
IUUC-Oan-073166 Ornithorhynchus anatinus 39.72 2.00e-74 270.00
IUUC-Ocu-074371 Oryctolagus cuniculus 38.12 9.00e-86 308.00
IUUC-Oba-075083 Oryza barthii 40.05 3.00e-87 313.00
IUUC-Obr-076405 Oryza brachyantha 40.14 1.00e-84 304.00
IUUC-Ogl-077683 Oryza glaberrima 40.05 6.00e-87 312.00
IUUC-Ogu-078486 Oryza glumaepatula 40.27 3.00e-87 313.00
IUUC-Oin-079679 Oryza indica 40.27 2.00e-90 324.00
IUUC-Olo-080243 Oryza longistaminata 39.60 9.00e-77 278.00
IUUC-Ome-081230 Oryza meridionalis 40.27 1.00e-90 324.00
IUUC-Oni-082961 Oryza nivara 40.27 2.00e-90 324.00
IUUC-Opu-083189 Oryza punctata 40.72 2.00e-88 317.00
IUUC-Oru-084353 Oryza rufipogon 40.51 1.00e-89 321.00
IUUC-Osa-085458 Oryza sativa 40.27 1.00e-90 324.00
IUUC-Ola-086940 Oryzias latipes 36.69 2.00e-80 290.00
IUUC-Olu-087580 Ostreococcus lucimarinus 38.96 2.00e-68 250.00
IUUC-Oga-088703 Otolemur garnettii 36.32 5.00e-78 283.00
IUUC-Oar-089829 Ovis aries 38.12 4.00e-86 310.00
IUUC-Ptr-090838 Pan troglodytes 38.12 7.00e-86 309.00
IUUC-Pan-092261 Papio anubis 38.03 2.00e-84 304.00
IUUC-Psi-093020 Pelodiscus sinensis 37.89 3.00e-86 310.00
IUUC-Pno-094858 Phaeosphaeria nodorum 37.61 3.00e-81 293.00
IUUC-Ppa-095531 Physcomitrella patens 39.91 3.00e-87 313.00
IUUC-Pfo-096812 Poecilia formosa 33.26 4.00e-61 226.00
IUUC-Pab-097805 Pongo abelii 40.00 4.00e-69 253.00
IUUC-Pop-100051 Populus trichocarpa 39.69 2.00e-80 290.00
IUUC-Pca-100152 Procavia capensis 37.89 3.00e-85 307.00
IUUC-Ppe-101244 Prunus persica 38.27 7.00e-82 295.00
IUUC-Pva-102529 Pteropus vampyrus 36.55 1.00e-78 285.00
IUUC-Pgr-103550 Puccinia graminis 38.96 3.00e-98 350.00
IUUC-Ptt-103951 Puccinia triticina 42.90 7.00e-73 266.00
IUUC-Pte-104151 Pyrenophora teres 36.78 2.00e-78 284.00
IUUC-Pyt-104571 Pyrenophora triticirepentis 36.12 3.00e-77 280.00
IUUC-Rno-105747 Rattus norvegicus 38.34 3.00e-86 310.00
IUUC-Sce-106418 Saccharomyces cerevisiae 34.44 1.00e-68 251.00
IUUC-Sha-107334 Sarcophilus harrisii 38.34 4.00e-86 310.00
IUUC-Sja-107794 Schizosaccharomyces japonicus 51.39 3.00e-134 469.00
IUUC-Ssl-108550 Sclerotinia sclerotiorum 41.25 4.00e-93 333.00
IUUC-Smo-108924 Selaginella moellendorffii 39.53 3.00e-83 300.00
IUUC-Sit-110102 Setaria italica 41.22 8.00e-89 318.00
IUUC-Sly-111668 Solanum lycopersicum 39.73 2.00e-82 298.00
IUUC-Stu-111928 Solanum tuberosum 39.73 6.00e-83 299.00
IUUC-Sar-113266 Sorex araneus 38.31 7.00e-70 256.00
IUUC-Sbi-114134 Sorghum bicolor 40.54 1.00e-87 315.00
IUUC-Sre-115114 Sporisorium reilianum 40.16 1.00e-99 354.00
IUUC-Ssc-115443 Sus scrofa 38.12 8.00e-86 308.00
IUUC-Tgu-117157 Taeniopygia guttata 37.44 2.00e-86 311.00
IUUC-Tru-118587 Takifugu rubripes 36.85 5.00e-80 289.00
IUUC-Tsy-119157 Tarsius syrichta 40.56 2.00e-75 274.00
IUUC-Tni-120427 Tetraodon nigroviridis 36.85 3.00e-79 286.00
IUUC-Tca-121368 Theobroma cacao 39.04 4.00e-82 296.00
IUUC-Tre-122074 Trichoderma reesei 42.13 5.00e-95 339.00
IUUC-Tvi-122349 Trichoderma virens 40.55 2.00e-93 334.00
IUUC-Tae-125651 Triticum aestivum 39.59 1.00e-87 315.00
IUUC-Tur-126532 Triticum urartu 40.10 1.00e-78 285.00
IUUC-Tme-126951 Tuber melanosporum 40.80 2.00e-94 337.00
IUUC-Tbe-128136 Tupaia belangeri 35.20 4.00e-74 270.00
IUUC-Ttr-129169 Tursiops truncatus 34.35 6.00e-44 169.00
IUUC-Uma-129399 Ustilago maydis 39.61 5.00e-95 339.00
IUUC-Vda-129842 Verticillium dahliae 41.97 6.00e-99 352.00
IUUC-Vpa-130440 Vicugna pacos 38.12 1.00e-85 308.00
IUUC-Vvi-131075 Vitis vinifera 40.09 7.00e-82 296.00
IUUC-Xma-133002 Xiphophorus maculatus 40.46 2.00e-67 247.00
IUUC-Yli-134569 Yarrowia lipolytica 38.25 2.00e-83 300.00
IUUC-Zma-135799 Zea mays 39.87 2.00e-85 307.00
Created Date 25-Jun-2017

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