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Tag Content
iUUCD ID IUUC-Pop-099416
Ensembl Protein ID POPTR_0008s11840.1
UniProt Accession B9HJ19; B9HJ19_POPTR
Genbank Protein ID EEE89760.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000344
Gene Name POPTRDRAFT_873811; POPTR_0008s11840g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0008s11840 POPTR_0008s11840.1 POPTR_0008s11840.1
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/Alpha-Helix/UBA 3.80e-24 85.2 105 146
ULD/UDP/UBQ/UBQ_PIM 1.10e-23 84.0 1 76
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
    +e +++q+ +MG +dr+++++aLraa+nn+e+A+eyL++g
   Q: 105 LEVAVQQILDMGggtWDRDTVVRALRAAYNNPERAIEYLYSG 146
    6889***********************************986 PP
   


   ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
    m+++vktlkg++f +ev+++dtv+++K+ki++ +g +p+eqq LI+++k+LkD+ttL e++i ++s+v+++++k
   Q: 1 MRIFVKTLKGSTFDIEVKPEDTVADVKKKIETAQGvavYPAEQQMLIHQAKVLKDNTTLDENKIVENSFVVIMLSK 76
    99*********************************99999*********************************987 PP
   

Organism Populus trichocarpa
Protein Sequence
(Fasta)
MRIFVKTLKG STFDIEVKPE DTVADVKKKI ETAQGVAVYP AEQQMLIHQA KVLKDNTTLD 60
ENKIVENSFV VIMLSKVRFA SLVLSFESYY VYGQAASSLV AGSNLEVAVQ QILDMGGGTW 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Pop-099416|UBD,UBA;ULD,UBQ_PIM|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTTTTGGGTA CAGTAGCAGC ATATACATAT ATATATAAAA CCCTTGCGGA TCGGAGAGTA 60
GAAACTCGAA GTCGAGAGTG GAGATCGCGA ATAAGACAAA GAAAGAAGGA TGAGGATTTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Pop-099416|UBD,UBA;ULD,UBQ_PIM|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG pop:POPTR_0008s11840g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-003116 Amborella trichopoda 82.21 4.00e-104 370.00
IUUC-Acl-008212 Aspergillus clavatus 37.70 3.00e-27 115.00
IUUC-Cel-018364 Caenorhabditis elegans 25.56 1.00e-18 87.00
IUUC-Csa-023183 Chlorocebus sabaeus 39.26 9.00e-34 136.00
IUUC-Cho-024814 Choloepus hoffmanni 44.27 3.00e-19 88.60
IUUC-Cgl-026495 Colletotrichum gloeosporioides 46.46 2.00e-17 82.80
IUUC-Dor-030358 Dipodomys ordii 39.26 2.00e-33 135.00
IUUC-Eca-034243 Equus caballus 37.80 2.00e-32 132.00
IUUC-Gga-040133 Gallus gallus 40.25 4.00e-25 108.00
IUUC-Gma-044370 Glycine max 84.43 1.00e-115 409.00
IUUC-Kpa-049314 Komagataella pastoris 28.65 5.00e-34 137.00
IUUC-Loc-051748 Lepisosteus oculatus 38.43 1.00e-32 132.00
IUUC-Laf-054293 Loxodonta africana 37.80 3.00e-30 125.00
IUUC-Mcc-055860 Macaca mulatta 39.26 9.00e-34 136.00
IUUC-Meu-056459 Macropus eugenii 40.74 5.00e-36 144.00
IUUC-Mpo-057609 Magnaporthe poae 48.44 4.00e-21 94.70
IUUC-Mtr-058713 Medicago truncatula 62.47 1.00e-120 425.00
IUUC-Obr-076631 Oryza brachyantha 67.83 2.00e-81 295.00
IUUC-Oga-088023 Otolemur garnettii 36.14 6.00e-31 127.00
IUUC-Oar-090387 Ovis aries 38.84 6.00e-32 130.00
IUUC-Pan-092140 Papio anubis 39.26 1.00e-33 136.00
IUUC-Ppa-095964 Physcomitrella patens 62.10 7.00e-73 266.00
IUUC-Sja-107851 Schizosaccharomyces japonicus 32.72 4.00e-39 154.00
IUUC-Tru-117920 Takifugu rubripes 40.17 4.00e-43 168.00
IUUC-Tvi-122617 Trichoderma virens 33.96 2.00e-35 142.00
IUUC-Tbe-127493 Tupaia belangeri 44.27 6.00e-19 87.80
IUUC-Ttr-128464 Tursiops truncatus 37.80 2.00e-32 132.00
IUUC-Vda-129946 Verticillium dahliae 50.40 2.00e-22 99.80
IUUC-Xtr-132679 Xenopus tropicalis 36.40 2.00e-22 99.80
Created Date 25-Jun-2017

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