iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014487

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000883

Gene Name

LOC100840365; BRADI_4g39167

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G39167	BRADI4G39167.1	BRADI4G39167.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-24	86.8	21	97

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++e flCp+++ +MrdPv ++sG t++r++I kw++++ +      cPvtr++l++++l P+++lr++i++w+++n+
   Q: 21   IYESFLCPLTKRIMRDPVNIESGATFEREAILKWFKESDSrgerlVCPVTRKELSSTELNPSIALRNTIDEWMHRNE 97
           799********************************666666778******************************997 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAEVQDGHYD SSTDSLRVEP IYESFLCPLT KRIMRDPVNI ESGATFEREA ILKWFKESDS 60
RGERLVCPVT RKELSSTELN PSIALRNTID EWMHRNEAAK LDVARKSLTS ESSESEILQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGAAG TTCAAGATGG CCATTATGAT TCGTCTACTG ACAGCTTGCG CGTGGAGCCT 60
ATATATGAAT CATTCCTGTG TCCACTCACA AAACGAATCA TGCGGGATCC TGTCAATATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100840365

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000143	Aegilops tauschii	90.58	0.00e+00	1464.00
IUUC-Atr-002916	Amborella trichopoda	60.07	0.00e+00	924.00
IUUC-Aly-005480	Arabidopsis lyrata	56.74	0.00e+00	813.00
IUUC-Ath-007569	Arabidopsis thaliana	57.13	0.00e+00	823.00
IUUC-Bol-015955	Brassica oleracea	56.64	0.00e+00	775.00
IUUC-Bra-017841	Brassica rapa	54.47	0.00e+00	792.00
IUUC-Gma-044318	Glycine max	64.70	0.00e+00	1032.00
IUUC-Hvu-047783	Hordeum vulgare	90.58	0.00e+00	1470.00
IUUC-Kpa-049181	Komagataella pastoris	40.82	4.00e-05	41.20
IUUC-Lpe-050971	Leersia perrieri	86.21	0.00e+00	1338.00
IUUC-Mtr-058511	Medicago truncatula	63.59	0.00e+00	998.00
IUUC-Mac-064911	Musa acuminata	63.44	0.00e+00	972.00
IUUC-Oba-075225	Oryza barthii	86.46	0.00e+00	1390.00
IUUC-Obr-076103	Oryza brachyantha	87.33	0.00e+00	1355.00
IUUC-Ogl-077529	Oryza glaberrima	86.58	0.00e+00	1392.00
IUUC-Ogu-078735	Oryza glumaepatula	86.46	0.00e+00	1390.00
IUUC-Oin-079422	Oryza indica	86.09	0.00e+00	1360.00
IUUC-Olo-080644	Oryza longistaminata	77.76	0.00e+00	1207.00
IUUC-Ome-081455	Oryza meridionalis	86.09	0.00e+00	1384.00
IUUC-Oni-082690	Oryza nivara	85.96	0.00e+00	1360.00
IUUC-Opu-083157	Oryza punctata	86.96	0.00e+00	1389.00
IUUC-Oru-085058	Oryza rufipogon	86.09	0.00e+00	1360.00
IUUC-Osa-086000	Oryza sativa	86.09	0.00e+00	1360.00
IUUC-Ppa-096021	Physcomitrella patens	47.72	0.00e+00	710.00
IUUC-Pop-099966	Populus trichocarpa	64.45	0.00e+00	1018.00
IUUC-Ppe-101973	Prunus persica	63.59	0.00e+00	994.00
IUUC-Smo-109219	Selaginella moellendorffii	46.33	0.00e+00	662.00
IUUC-Sit-110490	Setaria italica	84.44	0.00e+00	1328.00
IUUC-Sly-111702	Solanum lycopersicum	63.99	0.00e+00	944.00
IUUC-Stu-111962	Solanum tuberosum	63.22	0.00e+00	999.00
IUUC-Ssc-115521	Sus scrofa	26.05	2.00e-07	49.70
IUUC-Tca-121113	Theobroma cacao	65.31	0.00e+00	1038.00
IUUC-Tur-126573	Triticum urartu	90.21	0.00e+00	1462.00
IUUC-Vvi-131623	Vitis vinifera	65.07	0.00e+00	1062.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence