iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.70e-07	31.9	69	113

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg....plvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           CaiCl++++++     ++  C H fh+dC+  ++      + ++ +CPlCr
   Q: 69   CAICLYEIRKEdgkaIFTAECSHSFHFDCItSNV------KHGNRICPLCR 113
           ********444445599999*********97777......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS 60
GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS NVKHGNRICP LCRTQWKQVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCCCATGAC TCCCCCAGCC AGTAGAAAAA GCCAAAAAAG TAAACAAAAA GTCGTTAAAA 60
AAGTTAAATT AAAAAAAAAA TAGATAGTTG ACGTTTACTA AAGTGATTTG AATTGAACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032838--Vwaint_dom
IPR002035--VWF_A
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50234--VWFA
PS50089--ZF_RING_2

Pfam

PF00092--VWA
PF14624--Vwaint
PF17123--zf-RING_11

SMART

SM00184--RING
SM00327--VWA

Gene Ontology

GO:0005886--C:plasma membrane
GO:0008270--F:zinc ion binding

KEGG

ath:AT1G08050

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-016070	Brassica oleracea	76.79	0.00e+00	877.00
IUUC-Bra-018085	Brassica rapa	76.01	0.00e+00	813.00
IUUC-Dse-031363	Dothistroma septosporum	27.37	2.00e-19	90.50
IUUC-Kpa-049298	Komagataella pastoris	38.96	5.00e-07	48.10
IUUC-Pop-099340	Populus trichocarpa	33.13	9.00e-39	154.00
IUUC-Sre-115012	Sporisorium reilianum	45.83	5.00e-07	49.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence