iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121248

Ensembl Protein ID

EOY10125

UniProt Accession

A0A061EYF5; A0A061EYF5_THECC

Genbank Protein ID

EOY10125.1

Protein Name

Transducin family protein / WD-40 repeat family protein

Genbank Nucleotide ID

CM001883

Gene Name

TCM_025503

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_025503	EOY10125	EOY10125

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-60	198.4	142	181
UBD/Beta-Prp	8.00e-109	364.4	441	665

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd...tllvsGsdDgtikvWDlrtgvll 36
           gH++ v+++ f +d   tll sGsdD t++vWDl   +++
   Q: 142  GHKGVVSSIMFhPDvnkTLLFSGSDDATVRVWDLLAKKCV 181
           8***********4444699**************9877776 PP

UBD/Beta-Prp

   S: 50   gheaevtavkfspdgk.ilvtgseDrtikvwdls..........tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgv 139
           gh ++v av fs++   ++v+gs+Drtikvw+l+          + k   ++ +h++++ sl++ p+++ + sGs+drt+ vw l+    +   + gh++ 
   Q: 441  GHMGAVGAVAFSKKCRdFFVSGSSDRTIKVWSLNglsddieqpiNLKAKAVVAAHDKDINSLAVAPNDSLVCSGSQDRTACVWRLPDLVSVV-KFIGHKRG 540
           78899999999988555**************8888888888999999999999**************************************9.9******* PP
   S: 140  vncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsg 240
           +++v+++p +++++++s D+tv++W ++ g++l+t++g ht+sv   sf   g+++vs++ dg vklw ++t+ec+ t+  h+d v+ +++ +++e l++g
   Q: 541  IWSVEFSPVDQCVITASGDKTVKIWAIADGSCLKTFEG-HTSSVLRASFLTRGTQFVSCGADGLVKLWTIKTNECIATYDQHEDKVWALAVGKKTEMLATG 640
           *************************************9.************************************************************** PP
   S: 241  ssDgsiriW.dlrsgdllktlqlhn 264
           +sD +i++W d++  d   ++ +++
   Q: 641  GSDAVINLWhDSTAADKEEAFRKEE 665
           ************9999999998876 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAPVTFKRNY RCSQSLQQFY SGGPFAVSSD GSFIACACVE SIKIVDSSNA STKSTIEAES 60
GTITALALSP SDKLLFSAGH SRQIKVWDLD TLKCLRSWKG HDGPIMGMAC HASGGLLATS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATAAAAATT TCTGATCAAA TATTTTGGAG TATTTCAGGG TTTTCTTTAC ATGTAATTAG 60
ATTATTTTAT TAAGGGTTTA TTTCTCATAT CATAAGAATA AAACAAAAAG GGAATTAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	60.40	0.00e+00	1003.00
IUUC-Aml-002376	Ailuropoda melanoleuca	36.68	8.00e-154	536.00
IUUC-Atr-002486	Amborella trichopoda	64.19	0.00e+00	1173.00
IUUC-Apl-003519	Anas platyrhynchos	34.71	2.00e-124	439.00
IUUC-Aca-004363	Anolis carolinensis	35.50	6.00e-79	287.00
IUUC-Aly-006152	Arabidopsis lyrata	75.77	0.00e+00	1244.00
IUUC-Ath-006966	Arabidopsis thaliana	75.76	0.00e+00	1242.00
IUUC-Ago-007746	Ashbya gossypii	29.77	1.00e-102	366.00
IUUC-Acl-008009	Aspergillus clavatus	28.42	9.00e-106	377.00
IUUC-Afl-008681	Aspergillus flavus	28.59	6.00e-100	358.00
IUUC-Afu-008798	Aspergillus fumigatus	28.13	2.00e-97	349.00
IUUC-Ani-009278	Aspergillus nidulans	28.44	6.00e-114	404.00
IUUC-Ang-009640	Aspergillus niger	29.45	3.00e-112	399.00
IUUC-Aor-010160	Aspergillus oryzae	28.59	2.00e-99	356.00
IUUC-Ate-010320	Aspergillus terreus	29.50	7.00e-111	394.00
IUUC-Ame-010930	Astyanax mexicanus	39.80	8.00e-41	159.00
IUUC-Bgr-012054	Blumeria graminis	28.80	2.00e-104	373.00
IUUC-Bta-012611	Bos taurus	37.90	9.00e-151	526.00
IUUC-Bci-013797	Botrytis cinerea	29.63	4.00e-109	388.00
IUUC-Bdi-014384	Brachypodium distachyon	66.15	0.00e+00	1128.00
IUUC-Bol-016483	Brassica oleracea	71.99	0.00e+00	1244.00
IUUC-Bra-017798	Brassica rapa	74.30	0.00e+00	1229.00
IUUC-Cel-018664	Caenorhabditis elegans	27.71	8.00e-94	337.00
IUUC-Cja-019092	Callithrix jacchus	37.07	6.00e-156	543.00
IUUC-Cfa-021040	Canis familiaris	37.30	7.00e-157	546.00
IUUC-Cpo-022529	Cavia porcellus	36.82	7.00e-149	520.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	63.50	1.00e-52	197.00
IUUC-Csa-024205	Chlorocebus sabaeus	37.47	3.00e-157	548.00
IUUC-Cin-025560	Ciona intestinalis	35.43	3.00e-148	518.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	29.77	1.00e-115	409.00
IUUC-Cne-027082	Cryptococcus neoformans	31.80	5.00e-124	437.00
IUUC-Cme-027159	Cyanidioschyzon merolae	25.18	2.00e-35	144.00
IUUC-Dre-028138	Danio rerio	38.38	4.00e-158	551.00
IUUC-Dno-029914	Dasypus novemcinctus	35.20	6.00e-106	377.00
IUUC-Dor-030685	Dipodomys ordii	40.40	2.00e-100	359.00
IUUC-Dse-031429	Dothistroma septosporum	28.12	1.00e-98	353.00
IUUC-Dme-031995	Drosophila melanogaster	30.59	4.00e-100	358.00
IUUC-Ete-033086	Echinops telfairi	42.05	6.00e-95	341.00
IUUC-Eca-034354	Equus caballus	37.90	3.00e-151	528.00
IUUC-Eeu-034832	Erinaceus europaeus	40.43	2.00e-93	336.00
IUUC-Fca-036136	Felis catus	36.29	1.00e-144	506.00
IUUC-Fal-036859	Ficedula albicollis	38.69	4.00e-165	574.00
IUUC-Fox-037863	Fusarium oxysporum	28.52	6.00e-100	357.00
IUUC-Fso-038389	Fusarium solani	27.78	2.00e-107	382.00
IUUC-Gmo-038711	Gadus morhua	35.00	2.00e-139	489.00
IUUC-Ggr-039820	Gaeumannomyces graminis	27.46	6.00e-100	358.00
IUUC-Gga-040263	Gallus gallus	38.35	1.00e-166	579.00
IUUC-Gac-041291	Gasterosteus aculeatus	37.72	3.00e-166	578.00
IUUC-Gma-044026	Glycine max	74.73	0.00e+00	1271.00
IUUC-Ggo-044693	Gorilla gorilla	37.70	3.00e-156	545.00
IUUC-Hsa-046048	Homo sapiens	37.70	2.00e-156	545.00
IUUC-Hvu-047608	Hordeum vulgare	66.46	0.00e+00	1108.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	38.02	2.00e-163	568.00
IUUC-Kpa-049209	Komagataella pastoris	31.26	7.00e-114	404.00
IUUC-Lch-050085	Latimeria chalumnae	36.51	1.00e-149	523.00
IUUC-Lpe-050945	Leersia perrieri	66.30	0.00e+00	1084.00
IUUC-Loc-052679	Lepisosteus oculatus	39.09	2.00e-178	619.00
IUUC-Laf-053685	Loxodonta africana	37.32	4.00e-145	508.00
IUUC-Mcc-055861	Macaca mulatta	37.59	1.00e-155	542.00
IUUC-Meu-056820	Macropus eugenii	34.26	2.00e-112	399.00
IUUC-Mor-057234	Magnaporthe oryzae	28.17	3.00e-97	348.00
IUUC-Mpo-057456	Magnaporthe poae	27.91	9.00e-76	277.00
IUUC-Mtr-058122	Medicago truncatula	75.03	0.00e+00	1253.00
IUUC-Mla-058980	Melampsora laricipopulina	28.76	9.00e-85	307.00
IUUC-Mga-060080	Meleagris gallopavo	37.53	4.00e-163	567.00
IUUC-Mvi-060338	Microbotryum violaceum	33.52	5.00e-143	501.00
IUUC-Mmr-060762	Microcebus murinus	37.71	4.00e-152	531.00
IUUC-Mdo-061975	Monodelphis domestica	37.93	2.00e-154	539.00
IUUC-Mmu-064038	Mus musculus	37.88	1.00e-153	536.00
IUUC-Mac-065189	Musa acuminata	68.42	0.00e+00	1190.00
IUUC-Mpu-066526	Mustela putorius furo	37.73	8.00e-150	523.00
IUUC-Mlu-067716	Myotis lucifugus	37.68	4.00e-166	577.00
IUUC-Nfi-068474	Neosartorya fischeri	28.26	5.00e-102	364.00
IUUC-Ncr-068826	Neurospora crassa	26.60	1.00e-96	347.00
IUUC-Nle-069832	Nomascus leucogenys	37.47	2.00e-158	551.00
IUUC-Opr-071183	Ochotona princeps	36.98	3.00e-150	524.00
IUUC-Ont-072371	Oreochromis niloticus	38.66	2.00e-168	585.00
IUUC-Oan-073491	Ornithorhynchus anatinus	36.24	2.00e-133	469.00
IUUC-Oba-075963	Oryza barthii	67.11	0.00e+00	1119.00
IUUC-Obr-076173	Oryza brachyantha	67.75	0.00e+00	1112.00
IUUC-Ogl-077692	Oryza glaberrima	66.99	0.00e+00	1116.00
IUUC-Ogu-078965	Oryza glumaepatula	67.24	0.00e+00	1120.00
IUUC-Oin-079708	Oryza indica	66.63	0.00e+00	1113.00
IUUC-Olo-080679	Oryza longistaminata	66.38	0.00e+00	1111.00
IUUC-Oni-082960	Oryza nivara	66.50	0.00e+00	1112.00
IUUC-Opu-083282	Oryza punctata	66.59	0.00e+00	1090.00
IUUC-Oru-085224	Oryza rufipogon	66.87	0.00e+00	1116.00
IUUC-Osa-085320	Oryza sativa	66.87	0.00e+00	1116.00
IUUC-Ola-086370	Oryzias latipes	32.69	2.00e-75	276.00
IUUC-Olu-087814	Ostreococcus lucimarinus	35.61	4.00e-127	448.00
IUUC-Oga-088458	Otolemur garnettii	37.27	1.00e-161	563.00
IUUC-Oar-090032	Ovis aries	36.19	3.00e-113	401.00
IUUC-Ptr-090749	Pan troglodytes	37.21	2.00e-155	542.00
IUUC-Pan-091691	Papio anubis	36.12	3.00e-145	508.00
IUUC-Psi-093200	Pelodiscus sinensis	37.95	3.00e-165	574.00
IUUC-Pma-094165	Petromyzon marinus	36.57	2.00e-109	389.00
IUUC-Pno-095048	Phaeosphaeria nodorum	30.91	1.00e-91	330.00
IUUC-Ppa-095336	Physcomitrella patens	55.80	0.00e+00	920.00
IUUC-Pfo-096132	Poecilia formosa	39.36	1.00e-164	572.00
IUUC-Pab-097855	Pongo abelii	37.59	2.00e-158	552.00
IUUC-Pop-099434	Populus trichocarpa	74.65	0.00e+00	1264.00
IUUC-Pca-100232	Procavia capensis	48.77	5.00e-53	201.00
IUUC-Ppe-101665	Prunus persica	74.00	0.00e+00	1274.00
IUUC-Pva-102178	Pteropus vampyrus	37.94	4.00e-156	544.00
IUUC-Pgr-103288	Puccinia graminis	28.72	1.00e-84	307.00
IUUC-Ptt-103808	Puccinia triticina	31.57	7.00e-81	294.00
IUUC-Pte-104205	Pyrenophora teres	31.14	6.00e-113	400.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	30.35	5.00e-103	368.00
IUUC-Rno-105617	Rattus norvegicus	38.30	3.00e-155	541.00
IUUC-Sce-106281	Saccharomyces cerevisiae	32.42	3.00e-113	402.00
IUUC-Sha-107378	Sarcophilus harrisii	38.26	1.00e-156	546.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	32.36	6.00e-124	437.00
IUUC-Spo-108361	Schizosaccharomyces pombe	31.59	2.00e-115	409.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	30.08	7.00e-115	407.00
IUUC-Smo-109257	Selaginella moellendorffii	52.75	0.00e+00	897.00
IUUC-Sit-110258	Setaria italica	66.91	0.00e+00	1145.00
IUUC-Sly-111521	Solanum lycopersicum	71.63	0.00e+00	1213.00
IUUC-Stu-112718	Solanum tuberosum	79.56	2.00e-58	216.00
IUUC-Sar-113586	Sorex araneus	38.93	1.00e-22	100.00
IUUC-Sbi-114768	Sorghum bicolor	65.53	0.00e+00	1127.00
IUUC-Sre-115159	Sporisorium reilianum	32.71	9.00e-96	344.00
IUUC-Ssc-116342	Sus scrofa	27.76	6.00e-71	261.00
IUUC-Tgu-117320	Taeniopygia guttata	37.02	3.00e-151	528.00
IUUC-Tru-118024	Takifugu rubripes	37.49	2.00e-161	561.00
IUUC-Tni-119971	Tetraodon nigroviridis	38.40	3.00e-164	571.00
IUUC-Tre-122079	Trichoderma reesei	27.44	2.00e-104	373.00
IUUC-Tvi-122554	Trichoderma virens	28.07	9.00e-107	380.00
IUUC-Tae-123690	Triticum aestivum	67.28	0.00e+00	1125.00
IUUC-Tur-126436	Triticum urartu	61.32	0.00e+00	905.00
IUUC-Tme-126942	Tuber melanosporum	32.91	7.00e-123	434.00
IUUC-Ttr-128964	Tursiops truncatus	36.79	4.00e-153	534.00
IUUC-Uma-129473	Ustilago maydis	31.32	6.00e-103	368.00
IUUC-Vda-129749	Verticillium dahliae	29.28	1.00e-100	360.00
IUUC-Vvi-131511	Vitis vinifera	76.19	0.00e+00	1314.00
IUUC-Xtr-132816	Xenopus tropicalis	34.02	9.00e-136	476.00
IUUC-Xma-133672	Xiphophorus maculatus	38.58	7.00e-168	583.00
IUUC-Yli-134602	Yarrowia lipolytica	34.86	2.00e-138	486.00
IUUC-Zma-135559	Zea mays	64.03	0.00e+00	1101.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence