iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098877

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000343

Gene Name

POPTRDRAFT_562654; POPTR_0007s06120g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s06120	POPTR_0007s06120.1	POPTR_0007s06120.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-10	42.7	76	118

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ f++g  ++ l+C+H+fh+dCl kw     +++  ++CPlCr
   Q: 76   CAVCLSKFSEGesVRKLNCKHTFHKDCLDKW-----LQQSLATCPLCR 118
           ********66555******************.....789999*****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MASLSEFFSH LYTMSIVFLS LLLVEIVILF QSVIGSTLKS NKPIISTTQY LKHMEEKNPT 60
ISYSEKLTRQ QDSMECAVCL SKFSEGESVR KLNCKHTFHK DCLDKWLQQS LATCPLCRAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTCTC TCTCTGAATT CTTCTCCCAC CTCTATACCA TGTCCATAGT CTTCCTCAGT 60
CTTCTACTCG TTGAAATTGT AATTCTATTC CAGTCGGTCA TCGGAAGTAC CTTGAAGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0007s06120g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043108	Glycine max	52.76	9.00e-47	178.00
IUUC-Kpa-049143	Komagataella pastoris	48.15	4.00e-11	62.40
IUUC-Stu-112161	Solanum tuberosum	51.83	5.00e-44	169.00
IUUC-Tca-120996	Theobroma cacao	68.71	5.00e-64	235.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence