iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114377

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G413700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g042630	Sb02g042630.1	Sb02g042630.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	60.12	7.00e-107	384.00	IUUC-Ath-007603
E3 activity/RING/RING	85.23	3.00e-151	530.00	IUUC-Osa-085877

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MKFGKKYEAY MRGMEAELPA VGIKRLKKML KTCRRSTSPS PSPSAAASSD RRCTGHCTVC 60
DGSFFPSLLN EMSAVVGCFN EKAKKLLELH LASGFKKYTM WFTNKGGKSH GRLTQQGKDL 120

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Nucleotide Sequence
(Fasta)

ATGAAGTTCG GCAAGAAGTA CGAGGCGTAC ATGAGGGGCA TGGAGGCGGA GCTCCCCGCC 60
GTCGGGATCA AGCGCCTCAA GAAGATGCTC AAGACGTGCC GCCGCTCGAC TTCGCCTTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR033326--BAH1
IPR001370--BIR_rpt
IPR004331--SPX_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING

PROSITE

PS51382--SPX
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0005886--C:plasma membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0042742--P:defense response to bacterium
GO:0009626--P:plant-type hypersensitive response
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination
GO:0010337--P:regulation of salicylic acid metabolic process
GO:0080021--P:response to benzoic acid
GO:0010167--P:response to nitrate
GO:0009751--P:response to salicylic acid
GO:0009697--P:salicylic acid biosynthetic process
GO:0009627--P:systemic acquired resistance

KEGG

sbi:SORBI_02g042630

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000402	Aegilops tauschii	82.16	4.00e-148	516.00
IUUC-Atr-002937	Amborella trichopoda	59.56	1.00e-87	315.00
IUUC-Aly-006134	Arabidopsis lyrata	60.00	2.00e-110	391.00
IUUC-Ath-007603	Arabidopsis thaliana	60.12	1.00e-110	391.00
IUUC-Bdi-014332	Brachypodium distachyon	83.58	9.00e-151	525.00
IUUC-Bol-016417	Brassica oleracea	59.70	7.00e-107	379.00
IUUC-Bra-017786	Brassica rapa	59.40	2.00e-107	380.00
IUUC-Gma-043751	Glycine max	66.46	1.00e-125	441.00
IUUC-Hvu-047712	Hordeum vulgare	84.29	9.00e-152	528.00
IUUC-Itr-047901	Ictidomys tridecemlineatus	37.18	3.00e-09	54.70
IUUC-Kpa-049137	Komagataella pastoris	27.07	1.00e-09	56.60
IUUC-Lpe-050909	Leersia perrieri	80.97	2.00e-143	500.00
IUUC-Loc-051890	Lepisosteus oculatus	40.74	2.00e-08	53.50
IUUC-Mtr-057944	Medicago truncatula	64.72	2.00e-125	441.00
IUUC-Mac-065363	Musa acuminata	67.68	4.00e-129	453.00
IUUC-Opr-070278	Ochotona princeps	45.90	4.00e-07	48.90
IUUC-Oba-075836	Oryza barthii	80.00	1.00e-137	481.00
IUUC-Obr-076486	Oryza brachyantha	83.69	6.00e-149	519.00
IUUC-Ogl-077626	Oryza glaberrima	85.54	1.00e-152	531.00
IUUC-Ogu-078145	Oryza glumaepatula	79.57	3.00e-136	476.00
IUUC-Oin-079757	Oryza indica	85.54	1.00e-152	531.00
IUUC-Olo-080266	Oryza longistaminata	78.77	1.00e-135	474.00
IUUC-Ome-082016	Oryza meridionalis	79.38	4.00e-135	473.00
IUUC-Oni-082394	Oryza nivara	79.26	4.00e-136	476.00
IUUC-Opu-084051	Oryza punctata	70.46	3.00e-114	403.00
IUUC-Oru-085105	Oryza rufipogon	79.38	2.00e-137	480.00
IUUC-Osa-085877	Oryza sativa	85.23	2.00e-152	530.00
IUUC-Ola-087009	Oryzias latipes	31.25	2.00e-07	50.40
IUUC-Oga-088941	Otolemur garnettii	36.84	7.00e-08	50.10
IUUC-Pma-094166	Petromyzon marinus	51.02	4.00e-07	45.40
IUUC-Ppa-095647	Physcomitrella patens	44.00	2.00e-68	251.00
IUUC-Pfo-096721	Poecilia formosa	36.78	2.00e-08	53.10
IUUC-Pop-098883	Populus trichocarpa	66.77	1.00e-127	447.00
IUUC-Ppe-102102	Prunus persica	64.31	2.00e-122	430.00
IUUC-Smo-109536	Selaginella moellendorffii	47.08	6.00e-87	313.00
IUUC-Sit-110105	Setaria italica	88.31	3.00e-155	540.00
IUUC-Sly-111455	Solanum lycopersicum	64.86	4.00e-119	420.00
IUUC-Stu-112682	Solanum tuberosum	63.06	5.00e-120	422.00
IUUC-Sar-113316	Sorex araneus	30.93	7.00e-07	46.60
IUUC-Ssc-115481	Sus scrofa	41.82	1.00e-08	53.90
IUUC-Tca-121488	Theobroma cacao	66.36	8.00e-126	442.00
IUUC-Tae-124905	Triticum aestivum	83.58	2.00e-150	524.00
IUUC-Tur-126565	Triticum urartu	71.64	6.00e-119	419.00
IUUC-Tbe-127955	Tupaia belangeri	38.16	8.00e-09	53.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence