iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037056

Ensembl Protein ID

ENSFALP00000005455.1

UniProt Accession

U3JRQ1; U3JRQ1_FICAL

Genbank Protein ID

ENSFALP00000005455

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01011219

Gene Name

VPS41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000005238.1	ENSFALT00000005481.1	ENSFALP00000005455.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	92.50	0.00e+00	1600.00	IUUC-Hsa-047030

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MYILSYLPLC FLCPFQETRS NEESTDESEE DESEEEPKLK YERLSNGVTE ILQKDAASCM 60
TVHEKFLALG THYGKVYLLD VQGNITQKFD VSPVKINQIS LDESGEHMGV CSEDGKVQVF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAATAGTTGA ATAGCAAAAC TGGTTTGTGG ATAAGTTCAG AATGCTGTTC TGCCATGGAA 60
GACAAGATAT GCACAGTTTC CTTGCAAAAT TCCCCACTGC TTCTGGGAGA GGGGAAGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000547--Clathrin_H-chain/VPS_repeat
IPR011990--TPR-like_helical_dom
IPR016902--VPS41
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50236--CHCR
PS50089--ZF_RING_2

Pfam

PF00637--Clathrin

SMART

SM00299--CLH

Gene Ontology

GO:0030123--C:AP-3 adaptor complex
GO:0071439--C:clathrin complex
GO:0030136--C:clathrin-coated vesicle
GO:0005769--C:early endosome
GO:0030897--C:HOPS complex
GO:0031902--C:late endosome membrane
GO:0005765--C:lysosomal membrane
GO:0015630--C:microtubule cytoskeleton
GO:0008270--F:zinc ion binding
GO:0034058--P:endosomal vesicle fusion
GO:0008333--P:endosome to lysosome transport
GO:0006886--P:intracellular protein transport
GO:1902774--P:late endosome to lysosome transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000207	Aegilops tauschii	33.68	4.00e-130	458.00
IUUC-Aml-001435	Ailuropoda melanoleuca	91.90	0.00e+00	1590.00
IUUC-Atr-002975	Amborella trichopoda	37.10	7.00e-157	547.00
IUUC-Apl-003254	Anas platyrhynchos	98.70	0.00e+00	1699.00
IUUC-Aca-005067	Anolis carolinensis	92.38	0.00e+00	1598.00
IUUC-Aly-005839	Arabidopsis lyrata	35.67	7.00e-154	537.00
IUUC-Ath-006625	Arabidopsis thaliana	35.67	6.00e-154	538.00
IUUC-Ago-007960	Ashbya gossypii	25.43	2.00e-66	247.00
IUUC-Acl-008174	Aspergillus clavatus	30.09	4.00e-55	210.00
IUUC-Afl-008524	Aspergillus flavus	40.30	5.00e-38	153.00
IUUC-Afu-009054	Aspergillus fumigatus	28.95	2.00e-57	218.00
IUUC-Ani-009250	Aspergillus nidulans	28.10	3.00e-48	187.00
IUUC-Ang-009665	Aspergillus niger	29.33	1.00e-56	214.00
IUUC-Aor-010230	Aspergillus oryzae	40.30	6.00e-38	153.00
IUUC-Ate-010464	Aspergillus terreus	28.52	8.00e-52	199.00
IUUC-Ame-011311	Astyanax mexicanus	67.78	0.00e+00	1132.00
IUUC-Bgr-012099	Blumeria graminis	27.59	2.00e-49	191.00
IUUC-Bta-013327	Bos taurus	91.78	0.00e+00	1592.00
IUUC-Bci-013660	Botrytis cinerea	28.12	4.00e-50	193.00
IUUC-Bdi-014641	Brachypodium distachyon	34.94	2.00e-142	499.00
IUUC-Bol-015685	Brassica oleracea	35.75	4.00e-154	538.00
IUUC-Bra-016918	Brassica rapa	35.39	3.00e-152	532.00
IUUC-Cel-018385	Caenorhabditis elegans	28.22	2.00e-90	327.00
IUUC-Cja-018994	Callithrix jacchus	92.12	0.00e+00	1587.00
IUUC-Cfa-020405	Canis familiaris	92.38	0.00e+00	1595.00
IUUC-Cpo-022163	Cavia porcellus	91.66	0.00e+00	1584.00
IUUC-Cre-022626	Chlamydomonas reinhardtii	28.11	2.00e-40	160.00
IUUC-Csa-023134	Chlorocebus sabaeus	92.50	0.00e+00	1598.00
IUUC-Cho-024913	Choloepus hoffmanni	80.45	0.00e+00	1301.00
IUUC-Cin-025239	Ciona intestinalis	44.50	0.00e+00	715.00
IUUC-Cgl-026706	Colletotrichum gloeosporioides	29.24	4.00e-53	203.00
IUUC-Cne-026799	Cryptococcus neoformans	37.20	4.00e-163	568.00
IUUC-Cme-027200	Cyanidioschyzon merolae	24.43	4.00e-11	63.50
IUUC-Dre-028115	Danio rerio	81.62	0.00e+00	1419.00
IUUC-Dor-030947	Dipodomys ordii	86.20	0.00e+00	1464.00
IUUC-Dse-031544	Dothistroma septosporum	27.06	4.00e-44	173.00
IUUC-Dme-031830	Drosophila melanogaster	38.13	4.00e-154	538.00
IUUC-Ete-033051	Echinops telfairi	90.70	5.00e-138	484.00
IUUC-Eca-033501	Equus caballus	92.26	0.00e+00	1597.00
IUUC-Eeu-034555	Erinaceus europaeus	86.12	0.00e+00	833.00
IUUC-Fca-035809	Felis catus	91.66	0.00e+00	1584.00
IUUC-Fox-037949	Fusarium oxysporum	28.09	7.00e-50	192.00
IUUC-Fso-038282	Fusarium solani	27.90	2.00e-46	181.00
IUUC-Gmo-038540	Gadus morhua	81.14	0.00e+00	1397.00
IUUC-Ggr-039733	Gaeumannomyces graminis	26.87	9.00e-56	212.00
IUUC-Gga-040446	Gallus gallus	99.15	0.00e+00	1699.00
IUUC-Gac-041462	Gasterosteus aculeatus	82.71	0.00e+00	1413.00
IUUC-Gma-043148	Glycine max	36.48	4.00e-160	558.00
IUUC-Hsa-047030	Homo sapiens	92.50	0.00e+00	1599.00
IUUC-Hvu-047693	Hordeum vulgare	35.51	3.00e-143	502.00
IUUC-Itr-048318	Ictidomys tridecemlineatus	92.38	0.00e+00	1571.00
IUUC-Kpa-049224	Komagataella pastoris	22.92	2.00e-52	201.00
IUUC-Lch-049444	Latimeria chalumnae	81.97	0.00e+00	1373.00
IUUC-Lpe-050942	Leersia perrieri	33.22	6.00e-125	441.00
IUUC-Loc-052260	Lepisosteus oculatus	81.16	0.00e+00	1416.00
IUUC-Lma-053173	Leptosphaeria maculans	27.71	1.00e-50	195.00
IUUC-Laf-054185	Loxodonta africana	92.38	0.00e+00	1595.00
IUUC-Mcc-054816	Macaca mulatta	92.50	0.00e+00	1598.00
IUUC-Meu-056483	Macropus eugenii	90.66	4.00e-156	545.00
IUUC-Mor-056979	Magnaporthe oryzae	27.62	1.00e-52	201.00
IUUC-Mpo-057312	Magnaporthe poae	27.40	3.00e-55	211.00
IUUC-Mtr-057630	Medicago truncatula	35.71	8.00e-156	544.00
IUUC-Mla-058930	Melampsora laricipopulina	31.61	2.00e-24	105.00
IUUC-Mga-059942	Meleagris gallopavo	98.67	0.00e+00	1686.00
IUUC-Mvi-060386	Microbotryum violaceum	36.19	5.00e-157	548.00
IUUC-Mmr-060640	Microcebus murinus	92.62	0.00e+00	1602.00
IUUC-Mdo-062934	Monodelphis domestica	83.19	0.00e+00	1381.00
IUUC-Mmu-063488	Mus musculus	91.29	0.00e+00	1588.00
IUUC-Mac-064975	Musa acuminata	36.67	1.00e-151	530.00
IUUC-Mpu-065777	Mustela putorius furo	92.38	0.00e+00	1598.00
IUUC-Mlu-068052	Myotis lucifugus	91.56	0.00e+00	1585.00
IUUC-Nfi-068436	Neosartorya fischeri	28.46	3.00e-57	217.00
IUUC-Ncr-068840	Neurospora crassa	29.51	8.00e-59	222.00
IUUC-Nle-070063	Nomascus leucogenys	92.50	0.00e+00	1595.00
IUUC-Opr-070385	Ochotona princeps	82.10	0.00e+00	1371.00
IUUC-Ont-072367	Oreochromis niloticus	81.64	0.00e+00	1405.00
IUUC-Oan-073085	Ornithorhynchus anatinus	89.73	0.00e+00	1543.00
IUUC-Ocu-074672	Oryctolagus cuniculus	92.38	0.00e+00	1590.00
IUUC-Oba-075574	Oryza barthii	35.63	7.00e-150	524.00
IUUC-Obr-076203	Oryza brachyantha	35.64	4.00e-149	522.00
IUUC-Ogl-077909	Oryza glaberrima	35.63	7.00e-150	524.00
IUUC-Ogu-078053	Oryza glumaepatula	35.23	5.00e-147	514.00
IUUC-Oin-079700	Oryza indica	35.63	1.00e-149	523.00
IUUC-Olo-080707	Oryza longistaminata	36.25	2.00e-155	543.00
IUUC-Oni-082754	Oryza nivara	35.56	7.00e-149	521.00
IUUC-Opu-083854	Oryza punctata	35.56	7.00e-149	521.00
IUUC-Oru-085071	Oryza rufipogon	35.34	5.00e-148	518.00
IUUC-Osa-085370	Oryza sativa	35.63	7.00e-150	524.00
IUUC-Ola-086362	Oryzias latipes	80.15	0.00e+00	1377.00
IUUC-Oga-088078	Otolemur garnettii	91.96	0.00e+00	1581.00
IUUC-Oar-089679	Ovis aries	91.90	0.00e+00	1593.00
IUUC-Ptr-091680	Pan troglodytes	92.50	0.00e+00	1599.00
IUUC-Pan-092816	Papio anubis	92.24	0.00e+00	1134.00
IUUC-Psi-093890	Pelodiscus sinensis	95.17	0.00e+00	1650.00
IUUC-Pma-094654	Petromyzon marinus	65.82	0.00e+00	1131.00
IUUC-Pno-095071	Phaeosphaeria nodorum	28.78	2.00e-56	214.00
IUUC-Ppa-095198	Physcomitrella patens	33.94	2.00e-141	496.00
IUUC-Pfo-097465	Poecilia formosa	80.41	0.00e+00	1387.00
IUUC-Pab-098686	Pongo abelii	92.38	0.00e+00	1599.00
IUUC-Pop-100066	Populus trichocarpa	36.28	2.00e-156	546.00
IUUC-Pca-100990	Procavia capensis	82.22	0.00e+00	1383.00
IUUC-Ppe-101500	Prunus persica	36.05	2.00e-159	556.00
IUUC-Pva-102809	Pteropus vampyrus	92.38	0.00e+00	1594.00
IUUC-Pgr-103404	Puccinia graminis	32.79	1.00e-143	504.00
IUUC-Ptt-103952	Puccinia triticina	32.40	1.00e-133	470.00
IUUC-Pte-104216	Pyrenophora teres	28.10	1.00e-55	212.00
IUUC-Rno-105949	Rattus norvegicus	92.39	0.00e+00	1424.00
IUUC-Sce-106462	Saccharomyces cerevisiae	25.64	1.00e-57	218.00
IUUC-Sha-106689	Sarcophilus harrisii	90.45	0.00e+00	1577.00
IUUC-Sja-107696	Schizosaccharomyces japonicus	29.77	2.00e-95	343.00
IUUC-Spo-108173	Schizosaccharomyces pombe	29.71	7.00e-105	374.00
IUUC-Smo-109505	Selaginella moellendorffii	37.46	8.00e-149	520.00
IUUC-Sit-110176	Setaria italica	35.47	2.00e-153	536.00
IUUC-Sly-111671	Solanum lycopersicum	34.85	2.00e-157	549.00
IUUC-Sar-113073	Sorex araneus	79.33	0.00e+00	1226.00
IUUC-Sbi-114139	Sorghum bicolor	36.04	1.00e-147	516.00
IUUC-Sre-115158	Sporisorium reilianum	35.12	9.00e-162	564.00
IUUC-Ssc-115894	Sus scrofa	90.81	0.00e+00	1568.00
IUUC-Tgu-117481	Taeniopygia guttata	99.27	0.00e+00	1699.00
IUUC-Tru-118468	Takifugu rubripes	80.22	0.00e+00	1375.00
IUUC-Tni-120478	Tetraodon nigroviridis	79.29	0.00e+00	1367.00
IUUC-Tca-121780	Theobroma cacao	36.14	2.00e-156	546.00
IUUC-Tre-121900	Trichoderma reesei	28.31	4.00e-55	209.00
IUUC-Tvi-122343	Trichoderma virens	27.33	3.00e-54	207.00
IUUC-Tae-123578	Triticum aestivum	35.70	1.00e-145	510.00
IUUC-Tur-126430	Triticum urartu	34.99	3.00e-137	482.00
IUUC-Tme-127007	Tuber melanosporum	28.31	1.00e-57	218.00
IUUC-Tbe-128073	Tupaia belangeri	83.80	0.00e+00	1417.00
IUUC-Ttr-128879	Tursiops truncatus	91.90	0.00e+00	1579.00
IUUC-Uma-129356	Ustilago maydis	34.06	2.00e-162	566.00
IUUC-Vda-129676	Verticillium dahliae	29.81	2.00e-56	214.00
IUUC-Vvi-131744	Vitis vinifera	35.49	1.00e-153	536.00
IUUC-Xtr-132093	Xenopus tropicalis	81.74	0.00e+00	1398.00
IUUC-Xma-133199	Xiphophorus maculatus	81.26	0.00e+00	1384.00
IUUC-Yli-134385	Yarrowia lipolytica	27.50	1.00e-75	278.00
IUUC-Zma-135567	Zea mays	35.68	9.00e-145	507.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence