iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-134910

Ensembl Protein ID

Zm00001d029435_T001

UniProt Accession

A0A1D6K580; A0A1D6K580_MAIZE

Genbank Protein ID

ONL98743.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM007647

Gene Name

ZEAMMB73_Zm00001d029435

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d029435	Zm00001d029435_T001	Zm00001d029435_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-26	92.8	279	311
UBD/Beta-Prp	6.60e-42	145.7	272	485

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDl 30
           gHt +v++++f +   +ll+s+s D++ik+WD+
   Q: 279  GHTKGVSAIRFfPKygHLLLSASMDCKIKIWDV 311
           8*********995555889*************7 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdl.etgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkll 172
            cvh + gh++ v +++f+p +g+ l+s+s d  i++wd+  +++c++ t  gh+++v+ ++++ dg  + s+++Dr ++ Wd +tg+++
   Q: 272  RCVHEWVGHTKGVSAIRFFPkYGHLLLSASMDCKIKIWDVlGSRTCMR-TYMGHSKAVRDISFSNDGTKFLSAGYDRNIQYWDTETGQVI 360
           688888899999999999987888899999999999998536888888.89999999999999998888999999999999999999999 PP
   S: 173  rtltgghtdsvyslsfdsngke.lvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlq 261
            t++ g+ ++v +l+ d+++++ l++g  d+++  wd+++g++ +++  h   v+ + f +n+ r+v+ s+D+s+r+W      ++k ++
   Q: 361  STFSTGKVPYVVKLNPDEDKQHiLLAGMSDKKIVQWDMKSGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 450
           999777888888888777765415678888999999999999999999999999999999999999999999999999888888899999 PP
   S: 262  lhnssvisvavlsfgdnvlvlgsedskvniwklkk 296
            ++ +++++ +l+++ n l++ s d+++ i++ k+
   Q: 451  EPHMHSMPSIALHPNSNWLAAQSLDNQILIYSTKE 485
           99988888888899888888888888888888654 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MDLLQSSYAP DAASSPEDSA AASSPESSPL RLPSKSAAPA VDDTALALSS AASAARPLDP 60
SLHLVAFNPT ADQLWAPILG PQHPHAPISS ASGNRNHKLG HVEDAAVLPF LFDEQYNTFH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCCACAGAA AACCCTAACA CTAGATCCCC ACCATGGATC TCCTCCAGTC CTCTTACGCG 60
CCGGACGCCG CCTCGTCCCC GGAGGACTCG GCGGCCGCGT CCTCGCCGGA GTCCTCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	88.29	0.00e+00	970.00
IUUC-Aml-002243	Ailuropoda melanoleuca	47.19	4.00e-92	330.00
IUUC-Aca-004854	Anolis carolinensis	35.59	1.00e-80	293.00
IUUC-Acl-008220	Aspergillus clavatus	41.50	3.00e-115	408.00
IUUC-Afu-008773	Aspergillus fumigatus	42.37	2.00e-116	412.00
IUUC-Ate-010372	Aspergillus terreus	41.90	9.00e-115	406.00
IUUC-Bdi-014199	Brachypodium distachyon	89.67	0.00e+00	983.00
IUUC-Bra-017923	Brassica rapa	72.00	0.00e+00	820.00
IUUC-Csv-025868	Ciona savignyi	67.39	8.00e-36	140.00
IUUC-Cne-026885	Cryptococcus neoformans	43.92	3.00e-126	444.00
IUUC-Ete-032866	Echinops telfairi	49.05	3.00e-140	491.00
IUUC-Eca-033384	Equus caballus	50.57	2.00e-144	505.00
IUUC-Kpa-049318	Komagataella pastoris	47.04	4.00e-91	328.00
IUUC-Lpe-051153	Leersia perrieri	89.34	0.00e+00	1004.00
IUUC-Mla-058910	Melampsora laricipopulina	45.63	3.00e-137	481.00
IUUC-Nfi-068334	Neosartorya fischeri	43.05	5.00e-117	414.00
IUUC-Oan-073573	Ornithorhynchus anatinus	49.70	3.00e-134	471.00
IUUC-Obr-076510	Oryza brachyantha	90.58	0.00e+00	1015.00
IUUC-Ogu-078563	Oryza glumaepatula	90.42	0.00e+00	999.00
IUUC-Oin-079898	Oryza indica	93.81	0.00e+00	768.00
IUUC-Opu-083329	Oryza punctata	90.75	0.00e+00	1001.00
IUUC-Oru-084807	Oryza rufipogon	89.73	0.00e+00	892.00
IUUC-Psi-093527	Pelodiscus sinensis	49.29	9.00e-133	466.00
IUUC-Pab-097838	Pongo abelii	50.11	4.00e-124	437.00
IUUC-Pva-102418	Pteropus vampyrus	50.76	5.00e-146	510.00
IUUC-Pgr-103456	Puccinia graminis	49.26	5.00e-144	504.00
IUUC-Spo-108331	Schizosaccharomyces pombe	49.12	2.00e-100	359.00
IUUC-Sit-110446	Setaria italica	96.15	0.00e+00	1026.00
IUUC-Sar-113065	Sorex araneus	52.38	3.00e-32	132.00
IUUC-Tae-125557	Triticum aestivum	89.16	0.00e+00	983.00
IUUC-Tur-126554	Triticum urartu	89.14	0.00e+00	980.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence