iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095719

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544903

Gene Name

PHYPADRAFT_175824

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S14_164V6	PP1S14_164V6.1	PP1S14_164V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.20e-09	37.2	110	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl d+kdg  ++ lp C H+fha C+ +w       + +++CP Cr
   Q: 110  CSICLGDYKDGdiLRMLPeCRHMFHAPCIDAW------LRLHASCPMCR 152
           ********99977888889*************......**********8 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MNFSNTTTMQ VNLSKVGLGY GIAIAVGILV LVSTIMLASY VCVRVHQTSS GSQSGNSAGP 60
AAYHSGGDDA HGNPLTEWST SGLDQVTVES YPKVVYTASQ PPLNLQDNSC SICLGDYKDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATTTCA GCAACACTAC CACGATGCAA GTGAACCTGA GCAAAGTGGG GCTAGGCTAT 60
GGAATCGCTA TTGCGGTGGG AATACTTGTG CTCGTCTCTA CCATCATGCT GGCATCCTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_175824

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003007	Amborella trichopoda	50.00	5.00e-36	142.00
IUUC-Bdi-014078	Brachypodium distachyon	46.75	1.00e-18	85.50
IUUC-Bol-015802	Brassica oleracea	42.86	3.00e-31	127.00
IUUC-Bra-017359	Brassica rapa	40.37	3.00e-23	100.00
IUUC-Hvu-047604	Hordeum vulgare	36.68	4.00e-24	103.00
IUUC-Lpe-051435	Leersia perrieri	44.79	2.00e-34	137.00
IUUC-Mac-064609	Musa acuminata	47.53	3.00e-34	137.00
IUUC-Opu-084024	Oryza punctata	52.94	2.00e-21	95.10
IUUC-Pop-099567	Populus trichocarpa	44.83	8.00e-32	128.00
IUUC-Sit-110656	Setaria italica	48.00	1.00e-19	89.00
IUUC-Sly-111309	Solanum lycopersicum	42.33	4.00e-26	110.00
IUUC-Stu-112524	Solanum tuberosum	42.33	4.00e-26	110.00
IUUC-Sbi-114665	Sorghum bicolor	32.84	1.00e-16	78.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence