iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014772

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000880

Gene Name

LOC100831702; BRADI_1g66610

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G66610	BRADI1G66610.1	BRADI1G66610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.20e-34	116.7	283	355

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp++f+CpIsl+lM+dPv++++G+ty+r +Ie+wl+ g+ tcP+t+q+l +++l+Pn++lr+li +wce+n++
   Q: 283  VPDDFRCPISLDLMKDPVIVSTGQTYERVCIERWLEAGHDTCPKTQQKLPNKSLTPNYVLRSLIAQWCEANGI 355
           89********************************************************************986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MDEEAKHTTS EEDSTKAAAA EAASSLAPAG SESAEREEDV GNLVEKLAEL VDEIAVISEF 60
RNAYRRQFCN LSRRIRLLAP MLEEAKEGPR PLPMASVTAL RQLREALTGA RELLRLGSNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGAGG AGGCGAAGCA CACCACTAGC GAGGAGGACA GCACTAAGGC CGCTGCAGCC 60
GAGGCAGCCT CTTCGCTGGC GCCCGCGGGT TCGGAGTCGG CGGAGCGGGA GGAGGACGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR008709--Neurochondrin
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF05536--Neurochondrin
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100831702

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001147	Aegilops tauschii	91.78	0.00e+00	1009.00
IUUC-Gma-043064	Glycine max	64.06	0.00e+00	780.00
IUUC-Hvu-047052	Hordeum vulgare	91.46	0.00e+00	981.00
IUUC-Lpe-051284	Leersia perrieri	82.41	0.00e+00	991.00
IUUC-Mtr-058332	Medicago truncatula	61.05	0.00e+00	761.00
IUUC-Mac-065438	Musa acuminata	63.26	0.00e+00	753.00
IUUC-Oba-075184	Oryza barthii	82.12	0.00e+00	1015.00
IUUC-Obr-076590	Oryza brachyantha	82.62	0.00e+00	1013.00
IUUC-Ogl-077386	Oryza glaberrima	82.12	0.00e+00	1015.00
IUUC-Ogu-078326	Oryza glumaepatula	82.27	0.00e+00	1018.00
IUUC-Oin-079687	Oryza indica	82.12	0.00e+00	1014.00
IUUC-Olo-081001	Oryza longistaminata	82.27	0.00e+00	1018.00
IUUC-Ome-081417	Oryza meridionalis	81.97	0.00e+00	1028.00
IUUC-Oni-082379	Oryza nivara	82.12	0.00e+00	1013.00
IUUC-Opu-083774	Oryza punctata	80.03	0.00e+00	1026.00
IUUC-Oru-084885	Oryza rufipogon	82.12	0.00e+00	1014.00
IUUC-Osa-085946	Oryza sativa	81.82	0.00e+00	1008.00
IUUC-Pop-098809	Populus trichocarpa	62.73	0.00e+00	793.00
IUUC-Sit-110369	Setaria italica	83.56	0.00e+00	891.00
IUUC-Sly-111594	Solanum lycopersicum	63.32	0.00e+00	761.00
IUUC-Stu-112876	Solanum tuberosum	62.54	0.00e+00	751.00
IUUC-Sbi-113843	Sorghum bicolor	83.81	0.00e+00	931.00
IUUC-Tca-121745	Theobroma cacao	62.84	0.00e+00	759.00
IUUC-Tae-123188	Triticum aestivum	91.02	0.00e+00	1125.00
IUUC-Tur-126457	Triticum urartu	87.27	0.00e+00	1025.00
IUUC-Vvi-131752	Vitis vinifera	64.25	0.00e+00	747.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence