iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078326

Ensembl Protein ID

OGLUM03G12350.1

UniProt Accession

A0A0D9Z5C2; A0A0D9Z5C2_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM03G12350	OGLUM03G12350.1	OGLUM03G12350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.20e-33	115.3	293	365

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp++f+CpIsl+lM+dPv++++G+ty+r +Ie+wl+ g+ tcP+t+q+l +++l+Pn++lr+li +wce+n+ 
   Q: 293  VPDDFRCPISLDLMKDPVIVATGQTYERGCIERWLEAGHDTCPKTQQKLPNKSLTPNYVLRSLIAQWCEANGM 365
           89*******************************************************************9975 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MDEEAKPNPN ADAAPAAAEA AASSPPPLSS SESAEGKDKE EEKEEEEEEA GDLVEKLVEL 60
VEEIAAISDF RNAYRRQFCN LSRRIRLLAP MLEEAKEGPR PLPEVSYSAL RRLREALADS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAAAGCC ACTAATCTCC AACCTCGTCT ACACTTCTCC AAATCCCCCC ACGGCGCATC 60
GCCCGCTCGC CCTCGCCGCC ACCACCACCC GCCTCCGGCC ACCGCACACT AGGGCGGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR008709--Neurochondrin
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF05536--Neurochondrin
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001147	Aegilops tauschii	84.33	0.00e+00	935.00
IUUC-Aly-005681	Arabidopsis lyrata	58.11	0.00e+00	706.00
IUUC-Ath-007618	Arabidopsis thaliana	57.95	0.00e+00	706.00
IUUC-Bdi-014772	Brachypodium distachyon	81.60	0.00e+00	1038.00
IUUC-Bol-015254	Brassica oleracea	56.78	0.00e+00	690.00
IUUC-Bra-017857	Brassica rapa	56.71	0.00e+00	678.00
IUUC-Gma-043064	Glycine max	63.42	0.00e+00	789.00
IUUC-Hvu-047052	Hordeum vulgare	84.06	0.00e+00	917.00
IUUC-Lpe-051284	Leersia perrieri	92.11	0.00e+00	1140.00
IUUC-Mtr-058332	Medicago truncatula	61.82	0.00e+00	775.00
IUUC-Mac-065438	Musa acuminata	65.21	0.00e+00	788.00
IUUC-Oba-075184	Oryza barthii	99.70	0.00e+00	1248.00
IUUC-Obr-076590	Oryza brachyantha	93.15	0.00e+00	1173.00
IUUC-Ogl-077386	Oryza glaberrima	99.70	0.00e+00	1248.00
IUUC-Oin-079687	Oryza indica	99.70	0.00e+00	1248.00
IUUC-Olo-081001	Oryza longistaminata	99.70	0.00e+00	1250.00
IUUC-Ome-081417	Oryza meridionalis	99.26	0.00e+00	1264.00
IUUC-Oni-082379	Oryza nivara	99.55	0.00e+00	1246.00
IUUC-Opu-083774	Oryza punctata	95.72	0.00e+00	1251.00
IUUC-Oru-084885	Oryza rufipogon	99.55	0.00e+00	1247.00
IUUC-Osa-085946	Oryza sativa	99.24	0.00e+00	1241.00
IUUC-Ppa-095383	Physcomitrella patens	45.58	3.00e-154	538.00
IUUC-Pop-098809	Populus trichocarpa	62.16	0.00e+00	794.00
IUUC-Smo-109443	Selaginella moellendorffii	50.55	2.00e-155	541.00
IUUC-Sit-110369	Setaria italica	89.54	0.00e+00	931.00
IUUC-Sly-111594	Solanum lycopersicum	61.92	0.00e+00	764.00
IUUC-Stu-112876	Solanum tuberosum	60.64	0.00e+00	753.00
IUUC-Sbi-113843	Sorghum bicolor	79.02	0.00e+00	942.00
IUUC-Tca-121745	Theobroma cacao	61.22	0.00e+00	776.00
IUUC-Tae-123188	Triticum aestivum	83.43	0.00e+00	1038.00
IUUC-Tur-126457	Triticum urartu	80.00	0.00e+00	951.00
IUUC-Vvi-131752	Vitis vinifera	63.58	0.00e+00	772.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence