• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
UUCD2 ID IUUC-Tgu-117048
UUCD1 version UUC-TaG-00534
Ensembl Protein ID ENSTGUP00000010415.1
UniProt Accession H0ZIJ8; H0ZIJ8_TAEGU
Genbank Protein ID ENSTGUP00000010415
Protein Name Ribosome biogenesis protein WDR12; WD repeat-containing protein 12
Genbank Nucleotide ID ABQF01010166
Gene Name WDR12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSTGUG00000010086.1 ENSTGUT00000010525.1 ENSTGUP00000010415.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.70e-44 146.6 297 332
UBD/Beta-Prp 1.20e-45 155.8 202 368
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlrtgv 34
           Ht++vt++++ ++  + l+sGs D+ +k+WD+r+++
   Q: 297  HTGWVTSVKWsPTheHQLISGSLDNIVKLWDTRSCK 332
           **********9444577**************99876 PP
   

   UBD/Beta-Prp
   S: 83   tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
           t++++ tl+gh++ + s+ +s   + + s+s+d ti++wd etg   + tl+g++ v n+v+++p ++ l+sGs+Dr +rlWd ++++ 
   Q: 202  TRTPLATLSGHTEAISSVLWSD-AEEICSASWDHTIKLWDAETGDLKS-TLTGNK-VFNSVSYSPLCRRLASGSTDRHIRLWDPRSKDG 287
           577899***************9.99**********************9.***987.99**************************66654 PP
   S: 172  lrtl...tgghtdsvyslsfdsng.kelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
              l   t+ ht+ v+s++++++   +l+sgsld+ vklwd +  +  ++ l +h+d v++v+ + +  +l+sg++D+ ++++
   Q: 288  SLVLlslTS-HTGWVTSVKWSPTHeHQLISGSLDNIVKLWDTRsCKAPLYDLAAHEDKVLCVDWT-EAGLLLSGGADNKLYCY 368
           333334387.************99788****************54566****************9.999**********9997 PP
   
Organism Taeniopygia guttata
Functional Description
(View)

Functional Description


     Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
 Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
Protein Sequence
(Fasta)
SADHKYVEFD FLINGQFLRL PLVTHMEMEN ISTEEVVEIE YVEKYMAPQP EECIFHDDWI 60
SSVQATEEWI LTGCYDQTAR IWSVDGKSIT TIAGHTEVVK DVAWVKQDSL LCLLLSASMD 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Tgu-117048|E3,WD_repeat;UBD,Beta-Prp|Taeniopygia guttata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TCAGCGGATC ATAAGTATGT GGAATTTGAC TTCCTTATCA ATGGCCAGTT CCTGCGATTG 60
CCACTGGTCA CACACATGGA AATGGAAAAT ATTTCCACAG TAAGTCTTAC TCAATGTCTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Tgu-117048|E3,WD_repeat;UBD,Beta-Prp|Taeniopygia guttata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR028599--WDR12/Ytm1
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0008283--P:cell proliferation
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0007219--P:Notch signaling pathway
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000532 Aegilops tauschii 33.78 3.00e-54 205.00
IUUC-Aml-001997 Ailuropoda melanoleuca 85.37 7.00e-171 592.00
IUUC-Atr-002544 Amborella trichopoda 33.06 2.00e-49 189.00
IUUC-Apl-003981 Anas platyrhynchos 96.57 0.00e+00 692.00
IUUC-Aca-004370 Anolis carolinensis 86.51 0.00e+00 629.00
IUUC-Aly-006455 Arabidopsis lyrata 34.79 5.00e-52 197.00
IUUC-Ath-006669 Arabidopsis thaliana 34.79 2.00e-51 196.00
IUUC-Ago-007864 Ashbya gossypii 29.56 2.00e-32 133.00
IUUC-Acl-008177 Aspergillus clavatus 29.97 1.00e-32 133.00
IUUC-Afl-008617 Aspergillus flavus 30.58 4.00e-32 132.00
IUUC-Afu-008752 Aspergillus fumigatus 29.32 9.00e-30 124.00
IUUC-Ani-009136 Aspergillus nidulans 29.67 4.00e-32 132.00
IUUC-Ang-009701 Aspergillus niger 29.51 2.00e-30 126.00
IUUC-Aor-009884 Aspergillus oryzae 30.05 1.00e-31 130.00
IUUC-Ame-011432 Astyanax mexicanus 79.63 1.00e-170 592.00
IUUC-Bgr-012218 Blumeria graminis 28.85 3.00e-33 135.00
IUUC-Bta-012829 Bos taurus 85.11 3.00e-171 593.00
IUUC-Bci-013953 Botrytis cinerea 29.25 7.00e-34 137.00
IUUC-Bdi-014351 Brachypodium distachyon 35.54 2.00e-49 189.00
IUUC-Bol-016514 Brassica oleracea 35.69 6.00e-50 191.00
IUUC-Bra-016988 Brassica rapa 35.69 1.00e-49 189.00
IUUC-Cel-018569 Caenorhabditis elegans 33.60 3.00e-42 165.00
IUUC-Cja-019468 Callithrix jacchus 84.57 8.00e-165 572.00
IUUC-Cfa-020471 Canis familiaris 84.84 2.00e-169 587.00
IUUC-Cpo-022260 Cavia porcellus 84.84 2.00e-166 578.00
IUUC-Cre-022614 Chlamydomonas reinhardtii 31.20 3.00e-32 132.00
IUUC-Csa-023989 Chlorocebus sabaeus 84.57 6.00e-166 576.00
IUUC-Cho-024426 Choloepus hoffmanni 83.81 5.00e-139 486.00
IUUC-Cin-025789 Ciona intestinalis 45.72 7.00e-86 310.00
IUUC-Cne-027063 Cryptococcus neoformans 26.69 7.00e-14 71.60
IUUC-Dre-027907 Danio rerio 79.95 8.00e-172 595.00
IUUC-Dno-029225 Dasypus novemcinctus 85.64 3.00e-171 594.00
IUUC-Dor-031082 Dipodomys ordii 68.09 7.00e-121 426.00
IUUC-Dse-031308 Dothistroma septosporum 29.59 2.00e-33 136.00
IUUC-Dme-032189 Drosophila melanogaster 43.37 5.00e-83 301.00
IUUC-Ete-032247 Echinops telfairi 78.46 3.00e-154 537.00
IUUC-Eca-034285 Equus caballus 85.11 2.00e-170 591.00
IUUC-Eeu-035322 Erinaceus europaeus 76.64 3.00e-142 497.00
IUUC-Fca-036114 Felis catus 84.57 8.00e-170 589.00
IUUC-Fal-036891 Ficedula albicollis 99.15 0.00e+00 652.00
IUUC-Fox-037965 Fusarium oxysporum 26.38 2.00e-31 129.00
IUUC-Fso-038244 Fusarium solani 26.38 7.00e-31 127.00
IUUC-Gmo-039040 Gadus morhua 77.04 2.00e-167 581.00
IUUC-Gga-040610 Gallus gallus 97.35 0.00e+00 698.00
IUUC-Gac-042117 Gasterosteus aculeatus 76.78 4.00e-161 560.00
IUUC-Gma-043146 Glycine max 36.19 6.00e-55 207.00
IUUC-Ggo-045179 Gorilla gorilla 84.31 5.00e-163 566.00
IUUC-Hsa-046114 Homo sapiens 85.11 1.00e-164 572.00
IUUC-Hvu-047331 Hordeum vulgare 33.51 2.00e-51 196.00
IUUC-Itr-048275 Ictidomys tridecemlineatus 85.11 5.00e-171 593.00
IUUC-Kpa-049304 Komagataella pastoris 30.00 1.00e-39 156.00
IUUC-Lch-050655 Latimeria chalumnae 74.92 7.00e-118 416.00
IUUC-Lpe-051675 Leersia perrieri 35.90 8.00e-54 204.00
IUUC-Loc-052868 Lepisosteus oculatus 81.96 3.00e-172 597.00
IUUC-Lma-053258 Leptosphaeria maculans 29.17 3.00e-32 134.00
IUUC-Laf-053993 Loxodonta africana 84.84 2.00e-170 591.00
IUUC-Mcc-055128 Macaca mulatta 71.31 2.00e-131 461.00
IUUC-Meu-056501 Macropus eugenii 81.90 3.00e-145 507.00
IUUC-Mor-057114 Magnaporthe oryzae 26.24 2.00e-25 110.00
IUUC-Mtr-058367 Medicago truncatula 36.83 5.00e-52 197.00
IUUC-Mla-059107 Melampsora laricipopulina 26.86 1.00e-22 100.00
IUUC-Mga-059745 Meleagris gallopavo 96.05 0.00e+00 689.00
IUUC-Mvi-060362 Microbotryum violaceum 27.60 3.00e-26 112.00
IUUC-Mdo-062257 Monodelphis domestica 82.31 2.00e-174 604.00
IUUC-Mmu-063546 Mus musculus 85.11 4.00e-170 590.00
IUUC-Mac-065540 Musa acuminata 32.72 5.00e-50 191.00
IUUC-Mpu-066284 Mustela putorius furo 84.84 1.00e-170 592.00
IUUC-Mlu-067241 Myotis lucifugus 84.84 1.00e-170 592.00
IUUC-Nfi-068260 Neosartorya fischeri 30.05 1.00e-30 127.00
IUUC-Ncr-068719 Neurospora crassa 26.81 2.00e-24 106.00
IUUC-Nle-068981 Nomascus leucogenys 84.31 2.00e-164 571.00
IUUC-Opr-071218 Ochotona princeps 76.92 1.00e-149 522.00
IUUC-Ont-071646 Oreochromis niloticus 76.86 2.00e-164 571.00
IUUC-Oan-073453 Ornithorhynchus anatinus 86.44 0.00e+00 634.00
IUUC-Ocu-074008 Oryctolagus cuniculus 84.84 1.00e-170 591.00
IUUC-Oba-075712 Oryza barthii 29.57 9.00e-38 150.00
IUUC-Obr-076721 Oryza brachyantha 34.31 2.00e-53 202.00
IUUC-Ogl-077229 Oryza glaberrima 34.67 4.00e-54 204.00
IUUC-Ogu-078977 Oryza glumaepatula 29.57 5.00e-38 151.00
IUUC-Oin-079683 Oryza indica 34.67 2.00e-54 205.00
IUUC-Olo-080291 Oryza longistaminata 28.72 2.00e-24 105.00
IUUC-Ome-081834 Oryza meridionalis 35.20 2.00e-55 209.00
IUUC-Oni-082507 Oryza nivara 32.89 7.00e-49 187.00
IUUC-Opu-083396 Oryza punctata 34.67 5.00e-54 204.00
IUUC-Oru-085220 Oryza rufipogon 32.89 1.00e-48 186.00
IUUC-Osa-085767 Oryza sativa 34.67 2.00e-54 205.00
IUUC-Ola-087420 Oryzias latipes 77.78 7.00e-167 579.00
IUUC-Olu-087740 Ostreococcus lucimarinus 29.52 2.00e-33 136.00
IUUC-Oga-088264 Otolemur garnettii 84.31 1.00e-170 591.00
IUUC-Oar-089335 Ovis aries 84.31 8.00e-170 589.00
IUUC-Ptr-091320 Pan troglodytes 85.11 1.00e-164 572.00
IUUC-Pan-092833 Papio anubis 85.11 4.00e-166 577.00
IUUC-Psi-093504 Pelodiscus sinensis 89.63 0.00e+00 646.00
IUUC-Pma-094189 Petromyzon marinus 69.47 8.00e-150 523.00
IUUC-Pno-094929 Phaeosphaeria nodorum 27.64 6.00e-34 138.00
IUUC-Ppa-095429 Physcomitrella patens 34.22 1.00e-54 206.00
IUUC-Pfo-096337 Poecilia formosa 76.46 2.00e-167 581.00
IUUC-Pab-097571 Pongo abelii 85.11 1.00e-164 572.00
IUUC-Pop-099977 Populus trichocarpa 36.16 3.00e-56 212.00
IUUC-Pca-100394 Procavia capensis 79.52 4.00e-157 546.00
IUUC-Ppe-101848 Prunus persica 37.26 2.00e-56 213.00
IUUC-Pva-102921 Pteropus vampyrus 82.50 6.00e-77 280.00
IUUC-Pgr-103637 Puccinia graminis 28.91 1.00e-28 120.00
IUUC-Ptt-103781 Puccinia triticina 28.00 5.00e-28 118.00
IUUC-Pte-104135 Pyrenophora teres 28.12 2.00e-35 144.00
IUUC-Pyt-104609 Pyrenophora triticirepentis 27.87 1.00e-33 137.00
IUUC-Rno-105114 Rattus norvegicus 82.45 2.00e-168 584.00
IUUC-Sce-106401 Saccharomyces cerevisiae 29.14 8.00e-33 134.00
IUUC-Sha-107122 Sarcophilus harrisii 83.24 4.00e-166 577.00
IUUC-Sja-107766 Schizosaccharomyces japonicus 30.73 6.00e-38 151.00
IUUC-Spo-108134 Schizosaccharomyces pombe 29.05 5.00e-31 128.00
IUUC-Ssl-108398 Sclerotinia sclerotiorum 29.25 8.00e-35 140.00
IUUC-Smo-108720 Selaginella moellendorffii 32.97 7.00e-48 184.00
IUUC-Sit-110311 Setaria italica 34.66 4.00e-54 204.00
IUUC-Sly-111023 Solanum lycopersicum 32.92 5.00e-49 187.00
IUUC-Stu-112778 Solanum tuberosum 35.87 3.00e-54 205.00
IUUC-Sar-113596 Sorex araneus 76.86 1.00e-148 518.00
IUUC-Sbi-114193 Sorghum bicolor 34.67 3.00e-53 202.00
IUUC-Ssc-116066 Sus scrofa 84.57 2.00e-169 588.00
IUUC-Tsy-119573 Tarsius syrichta 51.33 8.00e-92 330.00
IUUC-Tni-119820 Tetraodon nigroviridis 76.78 7.00e-165 572.00
IUUC-Tca-121605 Theobroma cacao 35.50 8.00e-53 200.00
IUUC-Tre-121947 Trichoderma reesei 27.34 2.00e-31 129.00
IUUC-Tvi-122481 Trichoderma virens 27.82 6.00e-33 134.00
IUUC-Tae-125861 Triticum aestivum 34.04 1.00e-54 206.00
IUUC-Tur-126586 Triticum urartu 33.51 1.00e-53 202.00
IUUC-Tme-126900 Tuber melanosporum 31.40 2.00e-39 156.00
IUUC-Tbe-127736 Tupaia belangeri 61.82 1.00e-105 375.00
IUUC-Ttr-129041 Tursiops truncatus 73.40 2.00e-145 508.00
IUUC-Vpa-130260 Vicugna pacos 85.11 8.00e-171 592.00
IUUC-Vvi-131009 Vitis vinifera 35.28 1.00e-52 199.00
IUUC-Xtr-132083 Xenopus tropicalis 78.36 6.00e-168 583.00
IUUC-Xma-133094 Xiphophorus maculatus 75.93 3.00e-166 577.00
IUUC-Yli-134531 Yarrowia lipolytica 26.21 2.00e-17 83.60
IUUC-Zma-135509 Zea mays 34.13 2.00e-51 196.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved