iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017112

Ensembl Protein ID

Bra031085.1-P

UniProt Accession

M4EQL4; M4EQL4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra031085	Bra031085.1	Bra031085.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-27	94.1	333	363

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H ++ +c+++  +d +l+++Gs D+t++++D
   Q: 333  HDADLHCVDWnpHDdNLILTGSADNTVRLYD 363
           9999*******9445**************** PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MESDEAEAAG AASPSGGTVT PAPKKRGRKP KSKEESQTQE ERGGKMKESG KKTKQEEQSV 60
DEKYTQWKGL VPILYDWLAN HNLVWPSLSC RWGPQLEQAT YKNRQRLYLS EQTDGSVPNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAGCG ACGAAGCGGA AGCGGCAGGA GCAGCGTCGC CGAGCGGAGG AACCGTGACA 60
CCGGCGCCGA AGAAGAGAGG GCGGAAACCT AAGAGCAAGG AAGAGTCTCA GACGCAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003045	Amborella trichopoda	79.49	0.00e+00	739.00
IUUC-Aly-006131	Arabidopsis lyrata	94.16	0.00e+00	911.00
IUUC-Ath-007494	Arabidopsis thaliana	94.35	0.00e+00	909.00
IUUC-Bol-015567	Brassica oleracea	94.08	0.00e+00	953.00
IUUC-Gma-042982	Glycine max	81.15	0.00e+00	838.00
IUUC-Mtr-057993	Medicago truncatula	85.04	0.00e+00	815.00
IUUC-Mac-065523	Musa acuminata	80.55	0.00e+00	628.00
IUUC-Olu-087795	Ostreococcus lucimarinus	39.82	5.00e-87	314.00
IUUC-Pop-099098	Populus trichocarpa	83.33	0.00e+00	803.00
IUUC-Sit-110597	Setaria italica	78.15	0.00e+00	722.00
IUUC-Sly-111411	Solanum lycopersicum	77.61	0.00e+00	733.00
IUUC-Stu-112285	Solanum tuberosum	79.13	1.00e-168	585.00
IUUC-Sbi-114341	Sorghum bicolor	76.82	0.00e+00	709.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence