iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057993

Ensembl Protein ID

AES65422

UniProt Accession

A2Q555; A2Q555_MEDTR

Genbank Protein ID

ABN08755.1; ACJ85513.1; AES65422.1

Protein Name

Nucleosome/chromatin assembly factor group protein; Putative uncharacterized protein; WD40-like

Genbank Nucleotide ID

AC160012; BT052851; CM001218

Gene Name

MTR_2g039250; MtrDRAFT_AC160012g10v2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_2g039250	AES65422	AES65422

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-26	92.5	324	354

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H ++ +c+++  +d +l+++Gs D++i+++D
   Q: 324  HDADLHCVDWnpHDdNLILTGSADNSIRMFD 354
           9999*******9445***************9 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

METPPSTGAV KKKETRGRKP KPKEDKREEP SQVKSPRESK KEKQQQQLHQ QQQQQASVDE 60
KYSQWKSLVP VLYDWLANHN LVWPSLSCRW GPQLEQATYK NRQRLYLSEQ TDGSVPNTLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGCCATTCT GAAATTTGAA GTGTTAAGAG AGAGAAAGAA AGAGAAGAGA GAGAAAGAGA 60
GTAGCACAGA GAGTGAGAAA TGGAGACACC ACCCTCAACC GGCGCCGTGA AGAAGAAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

mtr:MTR_2g039250

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000914	Aegilops tauschii	75.79	0.00e+00	646.00
IUUC-Atr-003045	Amborella trichopoda	81.70	0.00e+00	743.00
IUUC-Aly-006131	Arabidopsis lyrata	86.58	0.00e+00	820.00
IUUC-Ath-007494	Arabidopsis thaliana	86.58	0.00e+00	821.00
IUUC-Bdi-014938	Brachypodium distachyon	76.82	0.00e+00	726.00
IUUC-Bol-015567	Brassica oleracea	79.96	0.00e+00	815.00
IUUC-Bra-017112	Brassica rapa	80.37	0.00e+00	824.00
IUUC-Gma-042982	Glycine max	88.48	0.00e+00	909.00
IUUC-Hvu-047149	Hordeum vulgare	76.87	5.00e-56	209.00
IUUC-Lpe-051595	Leersia perrieri	71.30	6.00e-178	616.00
IUUC-Mac-065523	Musa acuminata	82.59	0.00e+00	646.00
IUUC-Oba-075959	Oryza barthii	71.15	2.00e-180	624.00
IUUC-Obr-076021	Oryza brachyantha	78.52	0.00e+00	714.00
IUUC-Ogl-077211	Oryza glaberrima	77.44	0.00e+00	704.00
IUUC-Ogu-078314	Oryza glumaepatula	67.25	7.00e-165	573.00
IUUC-Oin-079269	Oryza indica	78.98	0.00e+00	711.00
IUUC-Olo-080631	Oryza longistaminata	67.00	8.00e-178	615.00
IUUC-Oni-082416	Oryza nivara	73.10	0.00e+00	649.00
IUUC-Opu-083571	Oryza punctata	67.52	1.00e-168	585.00
IUUC-Oru-084902	Oryza rufipogon	72.45	0.00e+00	634.00
IUUC-Osa-085579	Oryza sativa	78.98	0.00e+00	711.00
IUUC-Olu-087795	Ostreococcus lucimarinus	39.13	4.00e-87	314.00
IUUC-Ppa-095350	Physcomitrella patens	63.31	2.00e-177	614.00
IUUC-Pop-099098	Populus trichocarpa	86.87	0.00e+00	811.00
IUUC-Ppe-101724	Prunus persica	86.18	0.00e+00	804.00
IUUC-Sit-110597	Setaria italica	79.33	0.00e+00	719.00
IUUC-Sly-111411	Solanum lycopersicum	81.21	0.00e+00	729.00
IUUC-Stu-112285	Solanum tuberosum	83.43	2.00e-167	581.00
IUUC-Sbi-114341	Sorghum bicolor	78.67	0.00e+00	711.00
IUUC-Tca-121523	Theobroma cacao	88.39	0.00e+00	821.00
IUUC-Tae-125672	Triticum aestivum	77.61	0.00e+00	715.00
IUUC-Tur-126763	Triticum urartu	75.96	0.00e+00	641.00
IUUC-Vvi-131642	Vitis vinifera	80.00	0.00e+00	726.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence