iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112285

Ensembl Protein ID

PGSC0003DMT400006393

UniProt Accession

M0ZR98; M0ZR98_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400002498	PGSC0003DMT400006393	PGSC0003DMT400006393

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-18	67.0	288	318

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H+++ +c+++  +d +++++Gs D+t++++D
   Q: 288  HNADLHCVDWnpHDvNYILTGSADNTVRMFD 318
           999********9889***************9 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MKDKTEKPGQ QPPTVDERYT QWKSLVPVLY DWLANHNLLW PSLSCRWGPQ FEQATYKNRQ 60
RLYLSEQTDG SVPNTLVIAN CEVVKPRVAA AQHISQFNEE ARSPFVKKFK TIIHPGEVNR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAACCCCA ATCTGATGAG GAACAGAAAA ACCTAAAGTA CAATAGGAGT ATTTTCCCCC 60
CCTATAAATT AGAGAAGTAT ATTTAAGTGG GAATCTAAAA GGTACAGAGA CTGTTTGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000914	Aegilops tauschii	81.13	5.00e-147	513.00
IUUC-Atr-003045	Amborella trichopoda	79.15	1.00e-165	574.00
IUUC-Aly-006131	Arabidopsis lyrata	79.60	2.00e-167	581.00
IUUC-Ath-007494	Arabidopsis thaliana	79.60	1.00e-167	581.00
IUUC-Bdi-014938	Brachypodium distachyon	79.71	7.00e-166	575.00
IUUC-Bol-015567	Brassica oleracea	80.72	3.00e-166	577.00
IUUC-Bra-017112	Brassica rapa	79.13	1.00e-168	584.00
IUUC-Gma-042982	Glycine max	83.87	2.00e-171	594.00
IUUC-Lpe-051595	Leersia perrieri	68.48	4.00e-133	466.00
IUUC-Mtr-057993	Medicago truncatula	83.43	2.00e-167	581.00
IUUC-Mac-065523	Musa acuminata	80.92	1.00e-132	464.00
IUUC-Oba-075959	Oryza barthii	68.29	3.00e-137	480.00
IUUC-Obr-076021	Oryza brachyantha	76.34	4.00e-161	559.00
IUUC-Ogl-077211	Oryza glaberrima	75.49	3.00e-159	553.00
IUUC-Ogu-078314	Oryza glumaepatula	62.32	7.00e-121	426.00
IUUC-Oin-079269	Oryza indica	77.46	1.00e-161	561.00
IUUC-Olo-080631	Oryza longistaminata	69.88	4.00e-137	480.00
IUUC-Oni-082416	Oryza nivara	70.86	1.00e-144	505.00
IUUC-Opu-083571	Oryza punctata	69.91	5.00e-125	440.00
IUUC-Oru-084902	Oryza rufipogon	69.71	2.00e-139	488.00
IUUC-Osa-085579	Oryza sativa	77.46	1.00e-161	561.00
IUUC-Olu-087795	Ostreococcus lucimarinus	39.02	6.00e-62	230.00
IUUC-Ppa-095350	Physcomitrella patens	61.26	2.00e-125	441.00
IUUC-Pop-099098	Populus trichocarpa	81.10	2.00e-165	574.00
IUUC-Ppe-101803	Prunus persica	79.66	5.00e-169	586.00
IUUC-Sit-110597	Setaria italica	81.87	3.00e-164	570.00
IUUC-Sly-111411	Solanum lycopersicum	98.84	0.00e+00	709.00
IUUC-Sbi-114341	Sorghum bicolor	80.97	6.00e-162	562.00
IUUC-Tca-121523	Theobroma cacao	83.57	1.00e-171	595.00
IUUC-Tae-125281	Triticum aestivum	76.90	5.00e-163	566.00
IUUC-Tur-126763	Triticum urartu	76.97	5.00e-143	499.00
IUUC-Vvi-131642	Vitis vinifera	83.92	2.00e-173	600.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence