iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112112

Ensembl Protein ID

PGSC0003DMT400015240

UniProt Accession

M1A5N9; M1A5N9_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400005946	PGSC0003DMT400015240	PGSC0003DMT400015240

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-28	98.0	254	288

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrtgvll 36
           H +++tcla+ d +++ sGs+D +i+vWD ++  +l
   Q: 254  HGGPITCLAL-DfNRMYSGSWDMSIRVWDRSSLECL 288
           99******99.889***************7777776 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MAFECQKGIE SLRICSIEPS KNRDNLTLEL EKRKPLHKLD AKGGIVNSKC EELLTGNEVL 60
PGCRSITELP PVLISEIFNL LEPKELGIVS CACTLLYQIA SEHHVWKEFY CERWGQPILQ 120

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Nucleotide Sequence
(Fasta)

TGTAAGTCTC TCTCGTAATT TTTTTCCCCC AAATATTCAA ATCCCTAATT CATGCACAGC 60
AATTTGCATA AACTCTATTC GATTCTCCAT TTATTTTCTC TTTTGCGATC TGTTCAGATA 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12937--F-box-like
PF00400--WD40

SMART

SM00256--FBOX
SM00320--WD40

KEGG

sot:102590474

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ppa-095179	Physcomitrella patens	45.27	8.00e-105	373.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence