iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111542

Ensembl Protein ID

Solyc01g111590.2.1

UniProt Accession

K4B421; K4B421_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g111590.2	Solyc01g111590.2.1	Solyc01g111590.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-30	103.9	301	334

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           Htd+v+ +++  +  t l+s+++D  ++vWDl +
   Q: 301  HTDEVFQVEWdpNHeTVLASSGGDRRLMVWDLNR 334
           ***********644799**************965 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MAEEELEAAG ETEQDVEEEF AVWKKNTPLL YDLVVCHALE WPSLTVQWLP SPTTDDGAFA 60
VHKLILGTHT SDDCPNFLMV AKVHLPRNPA SGLEHNLMNP QIPKVEIVQK IHVDGEVNRA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGACTCCATT TTCCATTTTT GGCGGGAAAC AGAAAACCCT CATACTCCAT TAACAATGGC 60
TGAAGAAGAA TTGGAGGCGG CGGGAGAAAC CGAACAAGAT GTAGAAGAGG AGTTCGCCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

sly:101266569

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005708	Arabidopsis lyrata	71.54	7.00e-163	565.00
IUUC-Ath-007342	Arabidopsis thaliana	72.02	7.00e-163	565.00
IUUC-Ago-007892	Ashbya gossypii	38.10	2.00e-71	261.00
IUUC-Bol-016584	Brassica oleracea	72.02	3.00e-158	550.00
IUUC-Bra-016771	Brassica rapa	72.02	4.00e-161	560.00
IUUC-Gma-043256	Glycine max	68.23	2.00e-146	511.00
IUUC-Kpa-049258	Komagataella pastoris	36.43	4.00e-69	254.00
IUUC-Mtr-058292	Medicago truncatula	67.88	8.00e-145	505.00
IUUC-Oba-075939	Oryza barthii	57.56	3.00e-118	417.00
IUUC-Ogu-078437	Oryza glumaepatula	58.31	2.00e-118	418.00
IUUC-Oin-079872	Oryza indica	58.84	6.00e-120	423.00
IUUC-Oni-082852	Oryza nivara	58.84	6.00e-120	423.00
IUUC-Opu-083343	Oryza punctata	56.99	1.00e-116	412.00
IUUC-Pop-099884	Populus trichocarpa	71.17	2.00e-166	577.00
IUUC-Ppe-101659	Prunus persica	73.58	5.00e-159	553.00
IUUC-Stu-112318	Solanum tuberosum	98.17	0.00e+00	782.00
IUUC-Tca-121803	Theobroma cacao	72.24	9.00e-166	575.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence