iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121803

Ensembl Protein ID

EOX97656

UniProt Accession

A0A061E047; A0A061E047_THECC

Genbank Protein ID

EOX97656.1

Protein Name

Transducin family protein / WD-40 repeat family protein

Genbank Nucleotide ID

CM001880

Gene Name

TCM_006624

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_006624	EOX97656	EOX97656

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-33	112.9	301	333

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlr 31
           Ht++v+ +++  +  t l+s++dD  ++vWDl 
   Q: 301  HTGEVFQVEWdpNHeTVLASSGDDRRLMVWDLN 333
           9**********644799**************85 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MADDSEMNPD QVEEEFTVWK KNTPFLYDLV ISHPLEWPSL TVHWVPSSPS PYGADPSFSV 60
HKLVLGTHTS GGASDFLMIA DAVLPTLAAE SDFGAKNDDP VFPKVEITQR MLVDGEVNRA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCAAACCCT TGTTTAACTG AATTTTTTTT TGAGAAATAT TTAACTGACC TTTAATTTCC 60
CAAAAATATG CAAATAAAAG AAACCGAAAA CCCTCGCTCG GCTCCCTTAC ATTGCATTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005708	Arabidopsis lyrata	77.11	0.00e+00	666.00
IUUC-Ath-007342	Arabidopsis thaliana	77.94	0.00e+00	664.00
IUUC-Bol-015255	Brassica oleracea	77.86	0.00e+00	668.00
IUUC-Bra-017585	Brassica rapa	77.86	0.00e+00	671.00
IUUC-Gma-043256	Glycine max	70.05	2.00e-157	547.00
IUUC-Kpa-049258	Komagataella pastoris	36.01	4.00e-68	251.00
IUUC-Mtr-058292	Medicago truncatula	65.45	4.00e-148	516.00
IUUC-Mac-065473	Musa acuminata	62.92	2.00e-125	441.00
IUUC-Oba-075939	Oryza barthii	57.96	5.00e-115	406.00
IUUC-Oin-079872	Oryza indica	59.11	2.00e-116	411.00
IUUC-Oni-082852	Oryza nivara	59.11	2.00e-116	411.00
IUUC-Opu-083343	Oryza punctata	57.55	6.00e-113	399.00
IUUC-Pop-099884	Populus trichocarpa	77.00	0.00e+00	644.00
IUUC-Ppe-101659	Prunus persica	74.94	2.00e-171	593.00
IUUC-Sit-109983	Setaria italica	58.91	3.00e-121	427.00
IUUC-Sly-111542	Solanum lycopersicum	72.24	9.00e-166	575.00
IUUC-Stu-112318	Solanum tuberosum	71.80	6.00e-162	562.00
IUUC-Tae-125023	Triticum aestivum	58.84	6.00e-120	423.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence