iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131469

UUCD1 version

UUC-ViV-00741

Ensembl Protein ID

VIT_13s0156g00250.t01

UniProt Accession

F6HPT3; F6HPT3_VITVI

Genbank Protein ID

CCB56689.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596003

Gene Name

VIT_13s0156g00250

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_13s0156g00250	VIT_13s0156g00250.t01	VIT_13s0156g00250.t01

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	45.74	2.00e-44	177.00	IUUC-Ath-006889

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MENNSRGDIM DLDLNLEPLD PPHDSMLGLG SLLTEIETAH GRIEERIRQL EAVNSRARQR 60
QRWRQGRIPP QTTTISTEPM QVNSIEGRVQ NGECSVAGQE RTVENREGCK RNGAYLVAKA 120

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Nucleotide Sequence
(Fasta)

GGCCTTTTGG CGCCTCTCTC TCCCTCTAAA AGCCATGCCT ACAGTGAAGA AGAACAAGAA 60
GCCAAGGACG ATCCTTTTCC TGAAACCCTA GATATTGCTT CCACCAGCGC CCTCAGTTGA 120

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Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

vvi:100246046

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006481	Arabidopsis lyrata	44.83	8.00e-49	186.00
IUUC-Ath-006889	Arabidopsis thaliana	45.02	4.00e-50	191.00
IUUC-Bra-017862	Brassica rapa	43.87	2.00e-48	185.00
IUUC-Gma-044267	Glycine max	46.75	1.00e-50	192.00
IUUC-Mtr-058658	Medicago truncatula	44.44	3.00e-61	228.00
IUUC-Pop-099746	Populus trichocarpa	44.90	6.00e-78	283.00
IUUC-Ppe-101798	Prunus persica	47.99	6.00e-74	270.00
IUUC-Sly-111287	Solanum lycopersicum	40.48	3.00e-48	184.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence