iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111110

Ensembl Protein ID

Solyc06g061250.1.1

UniProt Accession

K4C6V5; K4C6V5_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g061250.1	Solyc06g061250.1.1	Solyc06g061250.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.40e-07	30.5	133	175

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++lp C H+fh  C+  w       + + +CPlCr
   Q: 133  CSVCLSEFqeDESLRLLPkCSHAFHVMCIDTW------LKSHSSCPLCR 175
           ********7655599999**************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MSTRDCSQGF CSFYCPQWCY IIFPPPPQFD LPDDDDDSSP NFSPLVIAII GILASAFLLV 60
SYYTIISKYC GNSRRRGSHH QEESELEEED HDPSNHEAWN VNAGGGLDEA LIKSIRVFKF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCACTA GGGATTGTTC TCAAGGATTT TGCAGTTTTT ACTGCCCACA ATGGTGTTAC 60
ATAATTTTCC CTCCACCACC CCAATTTGAC TTACCTGATG ATGATGATGA TTCTAGTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014160	Brachypodium distachyon	57.22	4.00e-50	191.00
IUUC-Bra-017128	Brassica rapa	43.64	8.00e-55	206.00
IUUC-Smo-108989	Selaginella moellendorffii	37.67	5.00e-22	96.70
IUUC-Stu-112087	Solanum tuberosum	94.64	2.00e-155	540.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence