iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113791

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G257400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g029600	Sb04g029600.1	Sb04g029600.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-08	33.8	320	352

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ +d +++++G+ D+t+++WD+r
   Q: 320  GHRDYSFASAWsPDgRTFATGNQDKTCRIWDVR 352
           899999**9***99999**************97 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MRGSMSNYYD DYDDIDEMED EYDLDDPADD MVDEQRGIRD SDAEDNDYGQ PNDKIPDTSS 60
VDARKGRDIQ GIPWEQINIT RKKYRQSRLE QYKNYENVPN SGEEAMKDCK PTEKGGMYYE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAATCAGGAG GCAGCACAAA TCCACGCACC GCCGCGTAAC CCTAGTCTTT ACCCTTCCTC 60
TTCAGCGCCG AGCAGATTCT CCTCCTTCGC GGCGCTCAGG CTCGGGCCCT CGGCGACGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sbi:SORBI_04g029600

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001117	Aegilops tauschii	82.85	0.00e+00	775.00
IUUC-Atr-003022	Amborella trichopoda	72.30	0.00e+00	633.00
IUUC-Aly-006558	Arabidopsis lyrata	71.22	6.00e-175	605.00
IUUC-Ath-006618	Arabidopsis thaliana	70.60	4.00e-174	603.00
IUUC-Bdi-014834	Brachypodium distachyon	88.70	0.00e+00	785.00
IUUC-Bol-016279	Brassica oleracea	66.52	3.00e-179	620.00
IUUC-Bra-016810	Brassica rapa	69.78	0.00e+00	629.00
IUUC-Gma-043519	Glycine max	73.55	0.00e+00	641.00
IUUC-Hvu-047189	Hordeum vulgare	83.74	1.00e-171	594.00
IUUC-Lpe-050907	Leersia perrieri	81.53	0.00e+00	710.00
IUUC-Mtr-058694	Medicago truncatula	72.80	0.00e+00	630.00
IUUC-Mvi-060306	Microbotryum violaceum	30.56	3.00e-07	49.70
IUUC-Mac-064914	Musa acuminata	74.36	0.00e+00	670.00
IUUC-Oba-075716	Oryza barthii	87.71	0.00e+00	782.00
IUUC-Obr-076012	Oryza brachyantha	81.61	1.00e-171	594.00
IUUC-Ogl-077272	Oryza glaberrima	86.87	0.00e+00	777.00
IUUC-Ogu-078041	Oryza glumaepatula	87.23	0.00e+00	779.00
IUUC-Oni-082371	Oryza nivara	87.23	0.00e+00	779.00
IUUC-Oru-085156	Oryza rufipogon	87.71	0.00e+00	783.00
IUUC-Osa-086197	Oryza sativa	87.71	0.00e+00	783.00
IUUC-Pop-099666	Populus trichocarpa	75.44	0.00e+00	654.00
IUUC-Spo-108140	Schizosaccharomyces pombe	29.84	2.00e-39	155.00
IUUC-Smo-109252	Selaginella moellendorffii	55.11	2.00e-143	501.00
IUUC-Sit-110341	Setaria italica	90.05	0.00e+00	729.00
IUUC-Sly-111343	Solanum lycopersicum	71.81	0.00e+00	651.00
IUUC-Stu-112207	Solanum tuberosum	73.43	0.00e+00	646.00
IUUC-Tca-121187	Theobroma cacao	71.81	0.00e+00	647.00
IUUC-Tae-122709	Triticum aestivum	78.48	0.00e+00	686.00
IUUC-Tur-126622	Triticum urartu	75.51	0.00e+00	754.00
IUUC-Vvi-131183	Vitis vinifera	69.09	0.00e+00	639.00
IUUC-Yli-134594	Yarrowia lipolytica	29.79	2.00e-36	145.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence