iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135812

Ensembl Protein ID

Zm00001d023914_T003

UniProt Accession

A0A1D6IWT6; A0A1D6IWT6_MAIZE

Genbank Protein ID

AQK40387.1; AQK40388.1; AQK40389.1

Protein Name

RING/FYVE/PHD-type zinc finger family protein

Genbank Nucleotide ID

CM000786; CM000786; CM000786

Gene Name

ZEAMMB73_Zm00001d023914

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d023914	Zm00001d023914_T003	Zm00001d023914_T003
Zm00001d023914	Zm00001d023914_T005	Zm00001d023914_T005

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.70e-10	41.0	273	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedek..slveCekCrewfHpaClkls..veeelpnsek..wiCpkCrs 53
           ++C+vC + ++d++   +v+C+ C++w+H +C ++s   +++++ +++  ++C  Cr 
   Q: 273  NYCPVCLKVYRDSEviPMVCCDVCEKWVHIECDGISeeKYQQFQADQNlqYTCAACRG 330
           79***********99999******************65333344444467******85 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAFHVACPIT CRRVCDCELG FGASASRKGG GGALAAVWAG TAAALEDFLA DPWLLRPAGA 60
VDADAATVQV EVPPLEPAPE DGEDEARRAA AQRGAAAAED LARRFESGAY GSPEAEGDED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCGCCCGTG TCGCCCGCGC CTCCAAATCC ACTTCCAAAC GCAAATCCAA CCAAACCATC 60
CCCGAATCCT GCCCAAATTT CCTCAAAACG CGTCAAACCC CACCCCTTCC GCCCGAATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cho-024652	Choloepus hoffmanni	35.11	1.00e-22	103.00
IUUC-Olu-087718	Ostreococcus lucimarinus	32.50	3.00e-11	64.70
IUUC-Pma-094258	Petromyzon marinus	37.50	2.00e-16	80.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence