iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121005

Ensembl Protein ID

EOX96860

UniProt Accession

A0A061DVX2; A0A061DVX2_THECC

Genbank Protein ID

EOX96860.1

Protein Name

RING/U-box superfamily protein

Genbank Nucleotide ID

CM001880

Gene Name

TCM_006010

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_006010	EOX96860	EOX96860

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-06	29.9	163	205

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl df   d+ + lp C H fh  C+ kw         + +CP+Cr
   Q: 163  CAICLADFldGDEIRMLPkCDHRFHVACIDKW------LLSHSSCPTCR 205
           ********99555999*9**************......888999****8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MPPFPCPSSH LPAPYIHPHR SLASCFLLLC VYHVSLPLHF SHLYLLTLDV HSPPFHPLSM 60
AQTSPTPSAT TPALSIACQE TQEPTVDLNL MIIVAAMLCA LVCALGLHSM LQCVFQCTHR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAAGCATAT CCCATGCCAC CATTCCCTTG CCCATCATCA CATTTACCAG CACCATATAT 60
TCATCCCCAT CGCTCTTTGG CCTCATGTTT CCTCTTGCTC TGTGTGTACC ATGTGTCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

tcc:TCM_006010

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000811	Aegilops tauschii	59.34	1.00e-27	114.00
IUUC-Atr-002631	Amborella trichopoda	50.81	1.00e-34	138.00
IUUC-Bta-012478	Bos taurus	55.10	5.00e-13	69.30
IUUC-Gac-041340	Gasterosteus aculeatus	47.83	6.00e-14	71.60
IUUC-Gma-044104	Glycine max	66.20	6.00e-52	195.00
IUUC-Hvu-047379	Hordeum vulgare	53.33	2.00e-33	133.00
IUUC-Laf-053975	Loxodonta africana	40.00	2.00e-14	73.90
IUUC-Mmu-064339	Mus musculus	40.00	1.00e-14	74.70
IUUC-Opr-070218	Ochotona princeps	56.52	1.00e-12	68.20
IUUC-Oba-075544	Oryza barthii	62.75	4.00e-36	142.00
IUUC-Ogl-077537	Oryza glaberrima	62.75	4.00e-36	142.00
IUUC-Ogu-078956	Oryza glumaepatula	61.76	2.00e-35	140.00
IUUC-Oin-079590	Oryza indica	62.75	9.00e-36	142.00
IUUC-Ome-081507	Oryza meridionalis	60.58	3.00e-33	133.00
IUUC-Oni-082676	Oryza nivara	62.75	4.00e-36	142.00
IUUC-Opu-083545	Oryza punctata	61.29	1.00e-30	125.00
IUUC-Oru-084832	Oryza rufipogon	62.75	9.00e-36	142.00
IUUC-Osa-086155	Oryza sativa	62.75	9.00e-36	142.00
IUUC-Pop-098859	Populus trichocarpa	76.97	5.00e-71	258.00
IUUC-Ppe-101304	Prunus persica	71.92	1.00e-54	204.00
IUUC-Stu-112500	Solanum tuberosum	61.38	2.00e-40	157.00
IUUC-Sbi-114355	Sorghum bicolor	59.50	1.00e-39	154.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence