iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014836

UUCD1 version

UUC-BrD-01207

Ensembl Protein ID

BRADI1G29870.1

UniProt Accession

I1GV82; I1GV82_BRADI

Protein Name

RING-type E3 ubiquitin transferase

Gene Name

LOC100842422

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G29870	BRADI1G29870.1	BRADI1G29870.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-23	83.2	275	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p +flCpIsle+M+dP       ty+r+sI+kwl+ g++tcP+t+qpl++ +l Pn +l++li +wc+ n++
   Q: 275  IPNDFLCPISLEIMTDP-------TYERRSIQKWLDAGQRTCPKTQQPLAHLSLAPNFALKNLIMQWCDNNKV 340
           799**************.......8********************************************9986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MLTSLFGARA ADPAEPSDQA PEPEPSGRQL SDGDLLDELA ATVGSACAFQ EFRRSHRKEC 60
FNLLRWLQLV LPLIQELRDA APPLTDDAYR RLALLSRAFH AARRLLRCCH DGSKIFLSLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGACGT CGCTGTTCGG GGCGCGGGCG GCGGACCCGG CGGAGCCGTC GGACCAGGCG 60
CCGGAGCCGG AGCCGTCGGG GCGGCAGCTC TCCGACGGGG ACCTGCTGGA CGAGCTGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000563	Aegilops tauschii	85.74	0.00e+00	1032.00
IUUC-Ath-007379	Arabidopsis thaliana	53.86	1.00e-175	609.00
IUUC-Gma-042825	Glycine max	57.58	0.00e+00	626.00
IUUC-Lpe-051074	Leersia perrieri	77.17	0.00e+00	902.00
IUUC-Mtr-058419	Medicago truncatula	55.39	0.00e+00	643.00
IUUC-Mac-065150	Musa acuminata	51.71	6.00e-168	583.00
IUUC-Oba-075907	Oryza barthii	78.26	0.00e+00	914.00
IUUC-Ogl-077690	Oryza glaberrima	78.26	0.00e+00	914.00
IUUC-Ogu-078150	Oryza glumaepatula	78.26	0.00e+00	914.00
IUUC-Oin-079405	Oryza indica	75.20	0.00e+00	858.00
IUUC-Olo-081047	Oryza longistaminata	77.37	0.00e+00	908.00
IUUC-Ome-081561	Oryza meridionalis	77.94	0.00e+00	922.00
IUUC-Oni-082780	Oryza nivara	78.26	0.00e+00	914.00
IUUC-Opu-083836	Oryza punctata	78.29	0.00e+00	927.00
IUUC-Oru-084958	Oryza rufipogon	78.26	0.00e+00	914.00
IUUC-Pop-099995	Populus trichocarpa	56.94	0.00e+00	690.00
IUUC-Ppe-101219	Prunus persica	59.27	0.00e+00	693.00
IUUC-Sit-110533	Setaria italica	81.17	0.00e+00	1012.00
IUUC-Sly-111424	Solanum lycopersicum	55.83	0.00e+00	671.00
IUUC-Stu-112097	Solanum tuberosum	56.19	0.00e+00	671.00
IUUC-Tae-125079	Triticum aestivum	84.77	0.00e+00	1068.00
IUUC-Tur-126004	Triticum urartu	84.42	0.00e+00	912.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence