iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111424

Ensembl Protein ID

Solyc04g082440.2.1

UniProt Accession

K4BVX1; K4BVX1_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc04g082440.2	Solyc04g082440.2.1	Solyc04g082440.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.60e-33	113.0	274	345

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p eflCpI+l++M dPv++++G+ty+r sI++wl+s+++tcP+t+++lt+ +l Pn +lr+li++wc++n+
   Q: 274  IPNEFLCPITLQIMADPVIISTGQTYERDSIQQWLDSNHHTCPKTGETLTHLSLAPNFALRNLIEEWCSKNN 345
           89*******************************************************************997 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MVSAGEIEFE QGFKMDEEND QSNRITTPID NKDLVYELMG IIHIISSYAE FRRTQRKESR 60
NLVRRMKLLL PLLEEIRDFQ GKIPESGVHC LVKMKKAFHS AKKLLKTCHC GSKLYLALES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAAGAGAA AAATCAAATC CAGAAAATTT CTTCCAAATT ATTAGGGTTT TGATTTTTCT 60
ATCCTCCAAG AAACAAACAA CCTATAATTT ATTGAATCCA AAATTCACAT TTTTATTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sly:101259042

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000563	Aegilops tauschii	55.67	0.00e+00	675.00
IUUC-Atr-002787	Amborella trichopoda	63.45	0.00e+00	749.00
IUUC-Aly-006301	Arabidopsis lyrata	59.35	0.00e+00	724.00
IUUC-Ath-007379	Arabidopsis thaliana	59.28	0.00e+00	723.00
IUUC-Bdi-014836	Brachypodium distachyon	55.83	0.00e+00	680.00
IUUC-Bol-016076	Brassica oleracea	59.02	0.00e+00	731.00
IUUC-Bra-017350	Brassica rapa	58.54	0.00e+00	724.00
IUUC-Csv-026196	Ciona savignyi	27.03	9.00e-12	65.90
IUUC-Gma-042863	Glycine max	62.24	0.00e+00	793.00
IUUC-Hvu-047325	Hordeum vulgare	55.30	2.00e-178	618.00
IUUC-Lpe-051266	Leersia perrieri	53.38	6.00e-175	607.00
IUUC-Mtr-058419	Medicago truncatula	60.03	0.00e+00	745.00
IUUC-Mac-065150	Musa acuminata	49.92	3.00e-165	574.00
IUUC-Oba-075533	Oryza barthii	56.69	0.00e+00	632.00
IUUC-Obr-076561	Oryza brachyantha	57.00	0.00e+00	635.00
IUUC-Ogl-077209	Oryza glaberrima	56.69	0.00e+00	632.00
IUUC-Ogu-078607	Oryza glumaepatula	57.02	0.00e+00	635.00
IUUC-Oin-080162	Oryza indica	57.02	0.00e+00	635.00
IUUC-Olo-080856	Oryza longistaminata	56.86	0.00e+00	634.00
IUUC-Ome-081763	Oryza meridionalis	56.86	0.00e+00	635.00
IUUC-Oni-082893	Oryza nivara	57.02	0.00e+00	635.00
IUUC-Opu-084068	Oryza punctata	56.69	0.00e+00	637.00
IUUC-Oru-085267	Oryza rufipogon	57.02	0.00e+00	635.00
IUUC-Osa-085448	Oryza sativa	57.02	0.00e+00	635.00
IUUC-Pop-099995	Populus trichocarpa	62.93	0.00e+00	778.00
IUUC-Ppe-101219	Prunus persica	65.62	0.00e+00	818.00
IUUC-Sit-110533	Setaria italica	55.66	0.00e+00	673.00
IUUC-Stu-112097	Solanum tuberosum	97.38	0.00e+00	1280.00
IUUC-Sbi-114691	Sorghum bicolor	54.59	1.00e-170	592.00
IUUC-Tca-121039	Theobroma cacao	63.33	0.00e+00	753.00
IUUC-Tae-123265	Triticum aestivum	55.74	0.00e+00	662.00
IUUC-Tur-126004	Triticum urartu	58.74	0.00e+00	629.00
IUUC-Vvi-131187	Vitis vinifera	64.14	0.00e+00	752.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence