iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057896

Ensembl Protein ID

AES94804

UniProt Accession

G7K9G1; G7K9G1_MEDTR

Genbank Protein ID

AES94804.1

Protein Name

Transducin/WD40 repeat protein

Genbank Nucleotide ID

CM001221

Gene Name

MTR_5g018520

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_5g018520	AES94804	AES94804

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-28	97.6	380	422
UBD/Beta-Prp	1.60e-40	140.6	103	423

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf........sd..tllvsGsdDgtikvWDlrtg 33
           gHt++v cla         ++  ++l sGs D+++kvW ++++
   Q: 380  GHTGPVKCLAAekdldvmlHErkWILYSGSLDKSVKVWKVKEN 422
           8*******98788888888444488**************9765 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls................................tg 84
           ++    k+ll tgs+++ i+vw++++   ++ ++++++ v+a+ +  +   ++tg++D+ i+vw +s                                 +
   Q: 103  LAA--TKDLLYTGSDSKNIRVWKNQK--EFAGFKSNSGLVKAIVIAGE--KILTGHQDGRIRVWRVSnkneqtyrraatlptlrnyikcsmkpsnyvevRR 197
           444..899****************99..557***************99..69************88888999999****************9998888744 PP
   S: 85   kcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl......ktgkllrtltggh 179
              + + +h d + +ls+ ++ + + s+s+d+t +vw  ++++cle   + hd++vn +vv +++ l+++Gs+D+tv++W+          +  +tl + +
   Q: 198  HRNVLWIKHYDAISCLSLTEDLSLIYSASWDKTFKVWRASNYKCLE-SVTAHDDAVNALVV-GFDGLVFTGSADGTVKIWRRemqgkgTKHFFSQTLLK-Q 295
           44444446**************************************.99********9987.5589****************75555555555556687.* PP
   S: 180  tdsvyslsfdsngkelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW...dlrsgdllktlqlhnssvisvav.... 272
           + +v+ l+++s+g++l +gs dg v++w  + + e   +l+gh+  v+++ +   + ++ sgs+D  i +W    +    ++++l++h   v + a+    
   Q: 296  ECAVTALTLNSDGTFLYAGSSDGLVNYWVREtNLEHCGILRGHKLAVLCLVAA--GSLVFSGSADMAICVWkrsITNEHVCMSVLSGHTGPVKCLAAekdl 394
           ****************************999555679****************..****************8853346779********99999999*9*9 PP
   S: 273  ...lsfgdnvlvlgsedskvniwklkkne 298
              l+  +++l++gs d++v++wk+k+n+
   Q: 395  dvmLHERKWILYSGSLDKSVKVWKVKENA 423
           9999999******************9987 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MTGSSRKGHT FLDEGSVHGR RFGKLKKDEF DGYNSDNHPR KNSPIKTTDA PHLDPQMASD 60
NSPYDASLSP LSKSPWHVNE EASSSEEALV GSLVREEGHI YSLAATKDLL YTGSDSKNIR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACAGGGT CATCAAGAAA AGGACATACA TTCTTGGATG AAGGAAGCGT TCATGGTAGA 60
AGATTTGGCA AATTGAAAAA AGACGAATTT GACGGTTACA ACTCCGACAA CCATCCTCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

mtr:MTR_5g018520

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007546	Arabidopsis thaliana	65.51	2.00e-136	478.00
IUUC-Gma-043604	Glycine max	82.29	0.00e+00	764.00
IUUC-Pop-099710	Populus trichocarpa	67.37	7.00e-149	519.00
IUUC-Ppe-101450	Prunus persica	63.60	2.00e-163	567.00
IUUC-Sly-111339	Solanum lycopersicum	62.98	3.00e-154	537.00
IUUC-Stu-112836	Solanum tuberosum	63.48	3.00e-153	534.00
IUUC-Tca-121487	Theobroma cacao	58.35	1.00e-160	559.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence