iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA19G34820	GLYMA19G34820.1	GLYMA19G34820.1
GLYMA19G34820	GLYMA19G34820.2	GLYMA19G34820.2
GLYMA19G34820	GLYMA19G34820.3	GLYMA19G34820.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-30	106.9	258	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+Cp+slelM+dPv+++sG+ty+r+sI+kwl++g + cP t+++l +++l+Pn+t++++i +wceen++
   Q: 258  IPPYFRCPLSLELMSDPVIVASGQTYERQSIQKWLDHGLTVCPNTHHRLVHTNLIPNYTVKAMIANWCEENNV 330
           8*********************************************************************986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MVMACEEFCL ILELVSFELT SQINTSSVKC LVNSISRFMH LVCCQAVKPM PLQKNCNNMV 60
GVLKRLKPVL DDIVDFKIPL DENLHRECEE LDMQVNEARE FIEKLGPKMS RIHSVLQSGE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAATTTCCC ATGGCTTTCT CAGGTGCCCT TTTCTAGTTT TTGATCCATT GGAGGATCTT 60
CTATTGTTTT GGGTGGTTTC TGGGTTTTGT ATGGTGTTAT ACATTTGAGA AATTCCTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007270	Arabidopsis thaliana	51.70	0.00e+00	669.00
IUUC-Bol-015931	Brassica oleracea	70.69	3.00e-113	402.00
IUUC-Mtr-057770	Medicago truncatula	74.15	0.00e+00	1050.00
IUUC-Mac-064726	Musa acuminata	51.38	0.00e+00	680.00
IUUC-Pop-099351	Populus trichocarpa	61.16	0.00e+00	847.00
IUUC-Ppe-101535	Prunus persica	62.50	0.00e+00	830.00
IUUC-Sly-111511	Solanum lycopersicum	54.50	0.00e+00	667.00
IUUC-Stu-112793	Solanum tuberosum	54.60	0.00e+00	702.00
IUUC-Tca-121486	Theobroma cacao	61.13	0.00e+00	870.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence