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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-007576
UUCD1 version UUC-ArT-00352
Ensembl Protein ID AT2G25410.1
UniProt Accession Q9SKK8; ATL22_ARATH
Genbank Protein ID AAD20701.2; AEC07698.1; AT2G25410.1
Protein Name RING-H2 finger protein ATL22; RING-type E3 ubiquitin transferase ATL22
Genbank Nucleotide ID AC006300; CP002685; AY461616
Gene Name ATL22; At2g25410; F13B15.7
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT2G25410 AT2G25410.1 AT2G25410.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 7.10e-08 33.7 327 369
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++  k+ +++lp C H+fh++C+ +w       + + +CP+Cr
   Q: 327  CPICLSEYatKETVRCLPeCEHCFHTECIDAW------LKLHSSCPVCR 369
           ********98666999****************......**********8 PP
   
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MTSKLLPLLL NLIFLFFFPL LNASEQKPCY SFSCSQESVV ARFPFSLFSY QPESCGYSGF 60
NLICKDDANT TLKLPKSEPF LVKEIDYETQ RIRLNDPENC LARRLLNFDP SGSPFSFLRS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007576|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAACGTAGGG CCTTCTCCAT TAGTGTATAA AGTACTCATT TCTAACTTTT TAATATATCT 60
TTGTGCCAAA CCACATTATG ACCTCAAAAC TACTTCCTCT CCTCCTCAAT CTCATCTTCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007576|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0732--Signal
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50089--ZF_RING_2
Pfam

PF13639--zf-RING_2
SMART

SM00184--RING
Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
KEGG ath:AT2G25410
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-005946 Arabidopsis lyrata 89.86 0.00e+00 660.00
IUUC-Bol-015711 Brassica oleracea 68.16 6.00e-142 496.00
IUUC-Bra-017148 Brassica rapa 54.75 4.00e-107 380.00
IUUC-Cin-025407 Ciona intestinalis 37.04 3.00e-11 60.10
IUUC-Gma-043197 Glycine max 41.64 3.00e-74 271.00
IUUC-Mtr-057646 Medicago truncatula 43.40 9.00e-74 270.00
IUUC-Sly-111740 Solanum lycopersicum 40.74 4.00e-63 234.00
IUUC-Stu-112029 Solanum tuberosum 40.74 2.00e-64 238.00
IUUC-Tca-121363 Theobroma cacao 45.89 2.00e-80 292.00
Created Date 25-Jun-2017

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