iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__1841__AT3G16720.1	fgenesh2_kg.3__1841__AT3G16720.1	fgenesh2_kg.3__1841__AT3G16720.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-07	32.6	119	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f++    +vlp C+H+fh dC+ +w         + +CPlCr
   Q: 119  CAVCLSEFEESesGRVLPnCKHTFHVDCIDMW------FHSHSTCPLCR 161
           ********55333666778*************......9999******8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MNTNDPDPIP FNRPEDNISG SKTYAMSGKI MLSAIVILFF VVILMVFLHL YARWYLLRAR 60
RRHLRRRSRN RRATMVFFTA DPSTAATSVV ASRGLDPNVI KSLPVFTFSD ETHKDPIECA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTGCACTTT CTCACGAACC TCTCTGTCTC GTCCATTACT TCAAAACCAA ATCTTTCATC 60
ATCTTCTTCT TCTTTCTTCA CCAGTTGACT CTCTTTCTAT CTCTCTCAAT CTCTCTGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
GO:0006952--P:defense response
GO:0010200--P:response to chitin

KEGG

aly:ARALYDRAFT_479140

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006860	Arabidopsis thaliana	91.15	4.00e-126	443.00
IUUC-Bol-015679	Brassica oleracea	70.30	6.00e-88	316.00
IUUC-Bra-016806	Brassica rapa	76.57	4.00e-85	306.00
IUUC-Gma-043514	Glycine max	62.86	2.00e-35	142.00
IUUC-Mtr-058446	Medicago truncatula	46.96	1.00e-36	145.00
IUUC-Mac-065089	Musa acuminata	54.22	9.00e-24	102.00
IUUC-Ppa-095981	Physcomitrella patens	42.07	2.00e-28	119.00
IUUC-Pop-098976	Populus trichocarpa	53.79	2.00e-55	207.00
IUUC-Ppe-101773	Prunus persica	47.93	5.00e-45	174.00
IUUC-Sja-107932	Schizosaccharomyces japonicus	36.54	2.00e-13	69.70
IUUC-Smo-109519	Selaginella moellendorffii	51.49	3.00e-24	102.00
IUUC-Sly-111104	Solanum lycopersicum	49.10	4.00e-58	217.00
IUUC-Stu-112132	Solanum tuberosum	51.91	2.00e-57	214.00
IUUC-Tca-121512	Theobroma cacao	56.45	2.00e-56	212.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence