iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057703

Ensembl Protein ID

KEH37240

UniProt Accession

A0A072VGE6; A0A072VGE6_MEDTR

Genbank Protein ID

KEH37240.1

Protein Name

E3 ubiquitin-protein ligase LIN-like protein, putative

Genbank Nucleotide ID

CM001218

Gene Name

MTR_2g436530

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_2g436530	KEH37240	KEH37240

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-09	38.7	910	941

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           H+ svtc++      + l+sGs D+ti+vW + 
   Q: 910  HKKSVTCFSIyepL-DSLLSGSTDKTIRVWKMN 941
           999*****976642.67*************975 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MMIDLKYIWV LVSINRYILN TIQNEKTRNT LKTRCISNLR TQNQEFFEFS DQSVLSNLYY 60
GIDNIEIAIQ SQHPEQRSFN LKKSEEMLQV PAMLDEDEFT ASIPNHYLVC CSYFYLSVVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACACTTCCC CTCCACATTA CCTCTTTCAT CAACATCATC TCAAGACTAT GATATGATGA 60
TAGACCTCAA ATACATATGG GTGCTAGTTT CAATCAACAG GTACATTCTC AACACAATAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016874--F:ligase activity
GO:0007165--P:signal transduction

KEGG

mtr:MTR_2g436530

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000535	Aegilops tauschii	50.63	0.00e+00	766.00
IUUC-Atr-002498	Amborella trichopoda	45.84	0.00e+00	679.00
IUUC-Aly-006263	Arabidopsis lyrata	46.08	3.00e-178	619.00
IUUC-Ath-006648	Arabidopsis thaliana	51.98	0.00e+00	871.00
IUUC-Bdi-014493	Brachypodium distachyon	50.88	0.00e+00	721.00
IUUC-Bol-016092	Brassica oleracea	46.29	0.00e+00	977.00
IUUC-Bra-016701	Brassica rapa	54.42	0.00e+00	855.00
IUUC-Gma-043180	Glycine max	77.60	0.00e+00	1456.00
IUUC-Hvu-047807	Hordeum vulgare	51.78	7.00e-132	463.00
IUUC-Lpe-051180	Leersia perrieri	50.55	0.00e+00	781.00
IUUC-Loc-052885	Lepisosteus oculatus	27.64	7.00e-08	49.70
IUUC-Mac-064996	Musa acuminata	52.49	0.00e+00	818.00
IUUC-Oba-075721	Oryza barthii	51.17	0.00e+00	792.00
IUUC-Obr-076233	Oryza brachyantha	51.64	0.00e+00	791.00
IUUC-Ogl-077542	Oryza glaberrima	51.17	0.00e+00	791.00
IUUC-Ogu-078363	Oryza glumaepatula	51.17	0.00e+00	787.00
IUUC-Oin-079050	Oryza indica	51.17	0.00e+00	791.00
IUUC-Olo-080332	Oryza longistaminata	47.36	0.00e+00	688.00
IUUC-Ome-081772	Oryza meridionalis	51.05	0.00e+00	781.00
IUUC-Oni-082467	Oryza nivara	51.17	0.00e+00	790.00
IUUC-Opu-083132	Oryza punctata	51.41	0.00e+00	793.00
IUUC-Oru-084836	Oryza rufipogon	51.17	0.00e+00	791.00
IUUC-Osa-085493	Oryza sativa	51.17	0.00e+00	791.00
IUUC-Pop-099360	Populus trichocarpa	52.83	0.00e+00	916.00
IUUC-Ppe-102099	Prunus persica	59.01	0.00e+00	977.00
IUUC-Sit-110371	Setaria italica	50.38	0.00e+00	788.00
IUUC-Sly-111793	Solanum lycopersicum	54.84	0.00e+00	855.00
IUUC-Stu-112760	Solanum tuberosum	54.81	0.00e+00	848.00
IUUC-Sbi-114833	Sorghum bicolor	48.55	0.00e+00	752.00
IUUC-Tca-121753	Theobroma cacao	61.45	0.00e+00	1018.00
IUUC-Tae-124317	Triticum aestivum	50.89	0.00e+00	771.00
IUUC-Tur-126343	Triticum urartu	50.76	0.00e+00	767.00
IUUC-Vvi-130975	Vitis vinifera	56.17	0.00e+00	980.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence