iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112760

Ensembl Protein ID

PGSC0003DMT400029480

UniProt Accession

M1ASW1; M1ASW1_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400011337	PGSC0003DMT400029480	PGSC0003DMT400029480
PGSC0003DMG400011337	PGSC0003DMT400029481	PGSC0003DMT400029481
PGSC0003DMG400011337	PGSC0003DMT400029484	PGSC0003DMT400029484

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-10	40.8	1074	1104

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDl 30
           H+  vtc++   s++ l+sGs D+tik+W +
   Q: 1074 HKKAVTCFSIseSGNCLLSGSADKTIKIWQM 1104
           8999*****9876699*************86 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MASSTPPVFS YDDDKLDLES VRKVVAVINQ HITALLADTK SWKSLKLKCS SKLDVCSNRG 60
YLEFSEQSIL SNLYWGIESI EAALQAKWSQ ERTSRLQNSE NMLQVPASLD EHGETAGIPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCATTATT ACTCAGTAAA GACAATAACA ACCTCAAACA TTTGTCCTTT ATTTCTTTAA 60
TGTAAAACTT TCCCTCCATT AATGGGGGCA ACGGCCATAT CTTTGTCTGT AGCATAGGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0007165--P:signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000535	Aegilops tauschii	51.33	0.00e+00	815.00
IUUC-Atr-002498	Amborella trichopoda	43.29	0.00e+00	669.00
IUUC-Aly-006263	Arabidopsis lyrata	46.05	0.00e+00	654.00
IUUC-Ath-006648	Arabidopsis thaliana	43.34	0.00e+00	1058.00
IUUC-Bdi-014493	Brachypodium distachyon	49.81	0.00e+00	756.00
IUUC-Bol-016092	Brassica oleracea	54.78	0.00e+00	874.00
IUUC-Bra-016701	Brassica rapa	55.09	0.00e+00	895.00
IUUC-Gma-043180	Glycine max	47.07	0.00e+00	1145.00
IUUC-Hvu-047807	Hordeum vulgare	52.36	1.00e-135	474.00
IUUC-Lpe-051180	Leersia perrieri	50.66	0.00e+00	816.00
IUUC-Mtr-057703	Medicago truncatula	54.81	0.00e+00	899.00
IUUC-Mac-064996	Musa acuminata	44.32	0.00e+00	1031.00
IUUC-Oba-075721	Oryza barthii	50.66	0.00e+00	822.00
IUUC-Obr-076233	Oryza brachyantha	50.78	0.00e+00	823.00
IUUC-Ogl-077542	Oryza glaberrima	50.66	0.00e+00	822.00
IUUC-Ogu-078363	Oryza glumaepatula	50.54	0.00e+00	816.00
IUUC-Oin-079050	Oryza indica	50.54	0.00e+00	819.00
IUUC-Olo-080332	Oryza longistaminata	47.79	0.00e+00	720.00
IUUC-Ome-081772	Oryza meridionalis	50.66	0.00e+00	822.00
IUUC-Oni-082467	Oryza nivara	50.54	0.00e+00	818.00
IUUC-Opu-083132	Oryza punctata	50.90	0.00e+00	822.00
IUUC-Oru-084836	Oryza rufipogon	50.54	0.00e+00	821.00
IUUC-Osa-085493	Oryza sativa	50.54	0.00e+00	822.00
IUUC-Pop-099360	Populus trichocarpa	49.81	0.00e+00	1194.00
IUUC-Ppe-102099	Prunus persica	58.26	0.00e+00	1002.00
IUUC-Sit-110371	Setaria italica	50.54	0.00e+00	837.00
IUUC-Sly-111793	Solanum lycopersicum	95.81	0.00e+00	2440.00
IUUC-Sbi-114833	Sorghum bicolor	48.91	0.00e+00	801.00
IUUC-Tca-121753	Theobroma cacao	55.92	0.00e+00	1055.00
IUUC-Tae-124317	Triticum aestivum	51.57	0.00e+00	820.00
IUUC-Tur-126343	Triticum urartu	51.69	0.00e+00	817.00
IUUC-Vvi-130975	Vitis vinifera	53.37	0.00e+00	1271.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence