iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131219

Ensembl Protein ID

VIT_06s0004g08230.t01

UniProt Accession

F6GU74; F6GU74_VITVI

Genbank Protein ID

CCB43390.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594951

Gene Name

RPT2; VIT_06s0004g08230

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_06s0004g08230	VIT_06s0004g08230.t01	VIT_06s0004g08230.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	6.30e-06	27.0	29	90

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 1    aDvilvvggeeffahkivLaasSsvFyalflmeleesksklmveikd..vqpevfrallkFlYt 62
           +Dv+++vg+  f+ hk +L a S + ++l+ me +e +    ++++d    pe f+   kF+Y 
   Q: 29   TDVVVEVGEANFSLHKFMLVAKSNYIRKLI-MESKEAD-LTNIDLSDipGGPEIFEKAAKFCYG 90
           7*****************************.9999999.999*****8889************6 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAASLKGNNR RSLAMERTGQ WVFSQEIPTD VVVEVGEANF SLHKFMLVAK SNYIRKLIME 60
SKEADLTNID LSDIPGGPEI FEKAAKFCYG VNFEITVHNV AALRCAAEYL QMTDKYCDGN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCTGACGAT CTCTATTCTC AGAAACCAAT CGATCTCTCA TGGCCGCCTC TCTCAAGGGC 60
AACAATAGGC GCTCTCTGGC CATGGAGAGG ACAGGTCAAT GGTAACAAGA TTACAATTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR027356--NPH3_dom
IPR029958--RPT2
IPR011333--SKP1/BTB/POZ

PROSITE

PS50097--BTB
PS51649--NPH3

Pfam

PF00651--BTB
PF03000--NPH3

SMART

SM00225--BTB

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004871--F:signal transducer activity
GO:0009638--P:phototropism

KEGG

vvi:100257120

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002779	Amborella trichopoda	69.51	0.00e+00	791.00
IUUC-Aly-005990	Arabidopsis lyrata	71.99	0.00e+00	837.00
IUUC-Ath-007213	Arabidopsis thaliana	71.65	0.00e+00	830.00
IUUC-Bgr-012176	Blumeria graminis	36.11	3.30e-01	27.70
IUUC-Bol-016475	Brassica oleracea	73.30	0.00e+00	800.00
IUUC-Bra-017356	Brassica rapa	73.52	0.00e+00	805.00
IUUC-Cgl-026410	Colletotrichum gloeosporioides	28.81	8.00e-05	40.00
IUUC-Gma-044399	Glycine max	72.30	0.00e+00	807.00
IUUC-Lch-050276	Latimeria chalumnae	28.89	6.00e-07	48.50
IUUC-Lma-053168	Leptosphaeria maculans	25.76	3.00e-04	38.50
IUUC-Mac-065031	Musa acuminata	55.96	1.00e-178	618.00
IUUC-Sly-111885	Solanum lycopersicum	79.03	0.00e+00	944.00
IUUC-Stu-112863	Solanum tuberosum	79.55	0.00e+00	939.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence