iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114110

Ensembl Protein ID

Sb03g028180.1

UniProt Accession

C5XR43; C5XR43_SORBI

Genbank Protein ID

EES03291.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G223500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g028180	Sb03g028180.1	Sb03g028180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-13	48.9	274	304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH ++v+ l++   + +l+s ++Dg +k+W 
   Q: 274  GHDGEVWQLEWdmGGMTLASTGGDGMVKLWQ 304
           8**********654355999999*******5 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTTERQVAEL GPGTACCGWN YCGRRLAAGA VDGSVSVYDS QPSPSFKWQA HEQAIVNVVW 60
LPPEYGDAIA CACADGTLSL WEEVAADDQL PTWRKCKIFE DGNSHILNVH FGLHLGSLKM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACTCGCCCT CGCACGGTCG GACCCGGAAC GCCGTAAATC CGGGCCCGCG GCCCAACCCA 60
ACTCAGGCAG ACACTCGCCG CCGCCGCCGC CGCCGCCGCC GCCGCCGCCG CCGCGACATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005635--C:nuclear envelope

KEGG

sbi:SORBI_03g028180

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001926	Ailuropoda melanoleuca	30.06	2.00e-31	129.00
IUUC-Atr-003124	Amborella trichopoda	65.02	1.00e-80	291.00
IUUC-Apl-003654	Anas platyrhynchos	30.80	1.00e-28	119.00
IUUC-Aca-004378	Anolis carolinensis	30.10	2.00e-28	118.00
IUUC-Aly-005963	Arabidopsis lyrata	57.81	1.00e-106	378.00
IUUC-Ath-007107	Arabidopsis thaliana	56.88	1.00e-108	385.00
IUUC-Bdi-014594	Brachypodium distachyon	87.85	5.00e-168	582.00
IUUC-Bol-016565	Brassica oleracea	57.32	1.00e-107	381.00
IUUC-Bra-017831	Brassica rapa	57.94	2.00e-108	384.00
IUUC-Cho-024660	Choloepus hoffmanni	29.76	3.00e-28	118.00
IUUC-Dre-028068	Danio rerio	29.19	2.00e-33	135.00
IUUC-Eca-033425	Equus caballus	29.43	1.00e-27	115.00
IUUC-Fal-037234	Ficedula albicollis	30.80	9.00e-28	119.00
IUUC-Gma-044300	Glycine max	60.44	5.00e-114	402.00
IUUC-Ggo-044944	Gorilla gorilla	30.12	3.00e-32	131.00
IUUC-Hsa-046038	Homo sapiens	30.12	3.00e-32	132.00
IUUC-Hvu-047455	Hordeum vulgare	82.24	6.00e-160	555.00
IUUC-Itr-048858	Ictidomys tridecemlineatus	29.79	7.00e-28	117.00
IUUC-Lch-050466	Latimeria chalumnae	30.93	1.00e-28	120.00
IUUC-Lpe-051064	Leersia perrieri	84.69	1.00e-161	561.00
IUUC-Meu-055958	Macropus eugenii	27.97	1.00e-17	83.60
IUUC-Mtr-057876	Medicago truncatula	55.11	4.00e-107	380.00
IUUC-Mla-058820	Melampsora laricipopulina	22.57	4.00e-17	81.30
IUUC-Mga-059348	Meleagris gallopavo	30.80	1.00e-28	119.00
IUUC-Mdo-061806	Monodelphis domestica	30.12	5.00e-33	134.00
IUUC-Mmu-064328	Mus musculus	31.58	2.00e-36	145.00
IUUC-Mac-064960	Musa acuminata	64.33	3.00e-120	423.00
IUUC-Nle-068977	Nomascus leucogenys	29.84	6.00e-30	123.00
IUUC-Oan-073098	Ornithorhynchus anatinus	30.45	2.00e-29	122.00
IUUC-Ocu-073911	Oryctolagus cuniculus	29.94	5.00e-32	130.00
IUUC-Oba-075325	Oryza barthii	79.50	6.00e-144	502.00
IUUC-Obr-076089	Oryza brachyantha	83.54	6.00e-158	548.00
IUUC-Ogl-077279	Oryza glaberrima	84.78	7.00e-159	551.00
IUUC-Ogu-078901	Oryza glumaepatula	79.19	2.00e-143	500.00
IUUC-Oin-079385	Oryza indica	79.42	1.00e-155	541.00
IUUC-Ome-081809	Oryza meridionalis	86.59	7.00e-145	506.00
IUUC-Oni-082185	Oryza nivara	75.85	9.00e-135	471.00
IUUC-Opu-083324	Oryza punctata	83.12	8.00e-157	545.00
IUUC-Oru-084801	Oryza rufipogon	85.40	7.00e-160	555.00
IUUC-Osa-085790	Oryza sativa	84.78	7.00e-159	551.00
IUUC-Olu-087855	Ostreococcus lucimarinus	25.45	9.00e-12	63.50
IUUC-Oga-088798	Otolemur garnettii	30.12	2.00e-32	131.00
IUUC-Oar-090298	Ovis aries	29.43	3.00e-26	115.00
IUUC-Ptr-091074	Pan troglodytes	30.12	2.00e-32	132.00
IUUC-Psi-093508	Pelodiscus sinensis	30.45	2.00e-28	118.00
IUUC-Ppa-095228	Physcomitrella patens	42.90	6.00e-71	259.00
IUUC-Pab-098629	Pongo abelii	30.12	2.00e-32	132.00
IUUC-Pop-099015	Populus trichocarpa	57.32	3.00e-110	390.00
IUUC-Ppe-101303	Prunus persica	59.01	3.00e-115	407.00
IUUC-Rno-104895	Rattus norvegicus	30.80	4.00e-32	134.00
IUUC-Sha-106829	Sarcophilus harrisii	29.38	3.00e-30	125.00
IUUC-Smo-109282	Selaginella moellendorffii	44.03	7.00e-73	266.00
IUUC-Sit-110393	Setaria italica	90.65	1.00e-174	604.00
IUUC-Sly-111125	Solanum lycopersicum	59.38	1.00e-114	405.00
IUUC-Stu-112745	Solanum tuberosum	52.92	9.00e-112	395.00
IUUC-Sar-113279	Sorex araneus	29.43	2.00e-27	115.00
IUUC-Ssc-115589	Sus scrofa	29.66	4.00e-28	117.00
IUUC-Tru-117985	Takifugu rubripes	29.02	6.00e-27	116.00
IUUC-Tsy-118913	Tarsius syrichta	29.72	1.00e-24	106.00
IUUC-Tca-120999	Theobroma cacao	51.39	2.00e-98	353.00
IUUC-Tae-122796	Triticum aestivum	82.24	3.00e-160	556.00
IUUC-Tur-126582	Triticum urartu	78.32	1.00e-133	468.00
IUUC-Tbe-127344	Tupaia belangeri	26.91	2.00e-15	75.90
IUUC-Ttr-128347	Tursiops truncatus	29.79	1.00e-27	116.00
IUUC-Vpa-130656	Vicugna pacos	29.79	2.00e-27	115.00
IUUC-Vvi-131103	Vitis vinifera	61.99	9.00e-120	422.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence