iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d003476	Zm00001d003476_T003	Zm00001d003476_T003
Zm00001d003476	Zm00001d003476_T002	Zm00001d003476_T002
Zm00001d003476	Zm00001d003476_T008	Zm00001d003476_T008

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.60e-98	330.5	25	362

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgye 88
           +Gl+N+gNtCY+NSvLQ+L+++ ++re+lle      n++ p + +++ll++l++lf ++   k+k+++++p+++++ +kk +e f++y+
   Q: 25   FGLENFGNTCYCNSVLQALYFCIPFREQLLE---YYANNKTPGDVEENLLTCLADLFMQISqaKKKTGVIAPKRFVQRVKKQNELFRSYM 111
           6******************************...4445566899****************98899999********************** PP
   S: 89   qqDaqEflaflldqleeelkkeknkpkeeeeeedkselsde.........aeekkkkknkslisdlFqgqlksqikclecdnvssreepf 169
           +qDa+Efl+fll++l + l+ke+    + ++++ +s+++++         a+  kk+   +l++++Fqg l+++++cl+c++v+ r+e+f
   Q: 112  HQDAHEFLNFLLNELVDILEKES----SAAKDSPQSSSPEKapngpvqplANGVKKEPPVTLVHKNFQGILTNETRCLRCETVTARDETF 197
           *******************6633....333333333333334445666667777777777****************************** PP
   S: 170  ldlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleL 259
           ldls+++++++     s+++cL++f ++e+l+ e+k++c+kc+++qea+k++k+kk P++L++hLkRf++ e+ ++ +k++ +v fp eL
   Q: 198  LDLSVDIEQNS-----SITSCLKNFCSTETLNAEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRFKYIEQLGRYKKLSYRVVFPMEL 282
           ***********.....9************************************************************************* PP
   S: 260  dlspfctspeekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetg.........staYvlfYk 336
           +ls+   +      ++++Y+L+avvvH G ++++GHYv++vk+ +++Wl fdD++V+ v+e++ +++ g         + +Y+lfY+
   Q: 283  KLSNTSDD------VDTEYSLFAVVVHVGsGPNHGHYVSLVKS-HNHWLFFDDENVEMVEEQTLQTFFGssheysgntDHGYILFYE 362
           **944433......489**************************.889*******************999*****************8 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MVMGASGSKL EKALGDQFPE GERYFGLENF GNTCYCNSVL QALYFCIPFR EQLLEYYANN 60
KTPGDVEENL LTCLADLFMQ ISQAKKKTGV IAPKRFVQRV KKQNELFRSY MHQDAHEFLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAACAGAGAA TCAGAATAAG TGTCGAACAC AAACAGCAAG AACCACCAAG CGACCAAGCC 60
ACCAAGGGAG CCCGATCTGA GTCAAGCGTC TTCCCATTTC ATCGCCTGGA AAAAGGCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

zma:100304268

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000934	Aegilops tauschii	87.75	0.00e+00	689.00
IUUC-Atr-002650	Amborella trichopoda	87.60	0.00e+00	666.00
IUUC-Ath-006663	Arabidopsis thaliana	85.56	0.00e+00	644.00
IUUC-Ago-007871	Ashbya gossypii	35.71	7.00e-48	184.00
IUUC-Bdi-014887	Brachypodium distachyon	96.74	0.00e+00	719.00
IUUC-Bra-016956	Brassica rapa	84.78	0.00e+00	643.00
IUUC-Cre-022711	Chlamydomonas reinhardtii	61.41	6.00e-121	426.00
IUUC-Cne-026900	Cryptococcus neoformans	39.86	1.00e-52	201.00
IUUC-Eeu-034916	Erinaceus europaeus	59.15	2.00e-97	348.00
IUUC-Ggr-039806	Gaeumannomyces graminis	45.06	1.00e-77	284.00
IUUC-Gma-043101	Glycine max	87.12	0.00e+00	669.00
IUUC-Mor-057072	Magnaporthe oryzae	43.81	3.00e-75	275.00
IUUC-Mpo-057424	Magnaporthe poae	45.06	6.00e-78	285.00
IUUC-Mtr-057715	Medicago truncatula	86.26	0.00e+00	653.00
IUUC-Mdo-062579	Monodelphis domestica	58.36	6.00e-121	426.00
IUUC-Mac-065323	Musa acuminata	86.07	0.00e+00	650.00
IUUC-Oba-075620	Oryza barthii	97.55	0.00e+00	719.00
IUUC-Obr-076208	Oryza brachyantha	97.55	0.00e+00	719.00
IUUC-Ogl-077763	Oryza glaberrima	97.55	0.00e+00	719.00
IUUC-Ogu-078571	Oryza glumaepatula	97.28	0.00e+00	716.00
IUUC-Oin-080002	Oryza indica	97.27	0.00e+00	743.00
IUUC-Opu-084002	Oryza punctata	97.01	0.00e+00	717.00
IUUC-Oru-084226	Oryza rufipogon	97.28	0.00e+00	748.00
IUUC-Osa-085453	Oryza sativa	97.28	0.00e+00	748.00
IUUC-Ppa-095275	Physcomitrella patens	81.50	4.00e-180	623.00
IUUC-Pop-099798	Populus trichocarpa	86.58	0.00e+00	663.00
IUUC-Ppe-101474	Prunus persica	86.81	0.00e+00	663.00
IUUC-Sce-106367	Saccharomyces cerevisiae	40.39	3.00e-60	226.00
IUUC-Sha-107400	Sarcophilus harrisii	58.20	2.00e-120	424.00
IUUC-Smo-109064	Selaginella moellendorffii	78.49	2.00e-164	570.00
IUUC-Sit-109700	Setaria italica	99.46	0.00e+00	734.00
IUUC-Sly-111210	Solanum lycopersicum	86.15	0.00e+00	654.00
IUUC-Stu-112398	Solanum tuberosum	85.99	0.00e+00	657.00
IUUC-Sbi-114562	Sorghum bicolor	99.46	0.00e+00	763.00
IUUC-Tca-121329	Theobroma cacao	87.12	0.00e+00	667.00
IUUC-Tre-122226	Trichoderma reesei	42.81	2.00e-74	273.00
IUUC-Tae-125638	Triticum aestivum	96.47	0.00e+00	714.00
IUUC-Tur-126331	Triticum urartu	96.17	0.00e+00	709.00
IUUC-Vda-129736	Verticillium dahliae	38.15	5.00e-56	212.00
IUUC-Vpa-130590	Vicugna pacos	55.62	6.00e-110	390.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence