iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099030

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000343

Gene Name

POPTRDRAFT_934054; POPTR_0007s10240g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s10240	POPTR_0007s10240.1	POPTR_0007s10240.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-12	47.1	586	620

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtg 33
           H ++++ ++f  ++  l++++s D+ +k+WDlr+ 
   Q: 586  HREPINVVKFahHSpFLFATSSFDHDVKLWDLRQK 620
           9999*******8443668**************975 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNCVCGIREA DVSSLQSRYL DSCKKHEVLP NSAVLSWFYK AEIQKSELGK CSIKFFLNQL 60
CNADIYPLID VFLAIDSSDV DAVDILHESP CNFNEEYVMP LLQTINLKLR VVDLHDMSPE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCGAGAAGC CACTTCGCTT ATACAACCGC CAATACGTAC CCTTCCTTTG GTCATAGCAC 60
AGGAATCTTA ATTCCGTCTG GAATCTTAAT TCCCTCTTGC AACTTCAGTT CTGTATTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR003603--U2A'_phosphoprotein32A_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00446--LRRcap
SM00320--WD40

KEGG

pop:POPTR_0007s10240g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mac-065375	Musa acuminata	53.88	0.00e+00	786.00
IUUC-Sly-111156	Solanum lycopersicum	55.68	0.00e+00	803.00
IUUC-Stu-112182	Solanum tuberosum	55.47	0.00e+00	814.00
IUUC-Tca-121252	Theobroma cacao	63.28	0.00e+00	1026.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence